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View Structure Prediction Details

Protein: CG15539-PA
Organism: Drosophila melanogaster
Length: 386 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG15539-PA.

Description E-value Query
Range
Subject
Range
gi|50749316 - gi|50749316|ref|XP_421583.1| PREDICTED: similar to Prolyl 4-hydroxylase alpha-1 subunit (4-PH alpha-...
361.0 [0..2] [385..126]

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Predicted Domain #1
Region A:
Residues: [1-173]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTLKDVEEA IRGLRLIQWT YSLPTAEMAK GVLQDIHHNT SLDGMQCITI ARHMVNYKDF  60
   61 IRAKEWLMVG LKMYEADEEI EYIYSQLGMP LVDFYELFVE IQDELGSRYL AMSELQLAIK 120
  121 NWPEKVSLQR ALSRLKMNIR IGKEPAEKKN KSKRVYKKCC SSECRPTAKL YCL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.09691
Match: 1na0A
Description: Designed protein cTPR3
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [174-386]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YKTTSSYFLR LAPLKMELLS LDPYMVLFHD VVSDKDIVSI RNLTKGKLAR TVTVSKDGNY  60
   61 TEDPDRTTKG TWLVENNALI QRLSQLTQDM TNFDIHDADP FQVLNYGIGG FYGIHFDFLE 120
  121 DAELDNFSDR IATAVFYLSD VPQGGATIFP KLGLSVFPKK GSALLWYNLD HKGDGDNRTA 180
  181 HSACPTVVGS RWVMTKWINE REQIFRRPCL TSI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.69897
Match: 2hbtA
Description: No description for 2hbtA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle