| Protein: | ORR22_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 696 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ORR22_ORYSJ.
| Description | E-value | Query Range |
Subject Range |
|
|
376.0 | [0..24] | [485..1] |
|
Region A: Residues: [1-410] |
1 11 21 31 41 51
| | | | | |
1 MLLGALRMEE RKGLMGRERD QFPVGMRVLA VDDDPVCLKV LETLLRRCQY HVTSTNQAIT 60
61 ALKLLRENRD MFDLVISDVH MPDMDGFKLL ELVGLEMDLP VIMLSVNGET KTVMKGITHG 120
121 ACDYLLKPVR IEELRNIWQH VVRRKFGNRE RNNLDFSKEC NKPQSADTDH GPYQPTCGSS 180
181 DQNGRSSRKR KELHGEDDDE GDDNDYQEND EPSAAKKPRV VWSVELHRKF VAAVNQLGID 240
241 KAVPKRILEL MNVEKLTREN VASHLQKYRL YLKRLGAVAS QQASIVAAFG GRDPSFLHIG 300
301 AFEGLQSYQP FAPSAALPSF NPHGLLTRTS AAAAFGLQEL AAPSSTIQTS TGNVTVGHCL 360
361 EENQQANLAQ GLTAAIGQPQ LQQNWIHQEG NGLSDVFSGS SLTNTLSSTL
|
| Detection Method: |  |
| Confidence: | 74.522879 |
| Match: | 1ny5A |
| Description: | Crystal structure of sigm54 activator (AAA+ ATPase) in the inactive state |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein histidine kinase activity | 2.35011582062573 | bayes_pls_golite062009 |
| two-component sensor activity | 2.32303301074957 | bayes_pls_golite062009 |
| phosphotransferase activity, nitrogenous group as acceptor | 2.28838869071567 | bayes_pls_golite062009 |
| two-component response regulator activity | 1.45919623810582 | bayes_pls_golite062009 |
| binding | 1.30574971150356 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.0324692870996578 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.0319901144782286 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.0199205367873159 | bayes_pls_golite062009 |
| nucleotide binding | 0.00540039127746217 | bayes_pls_golite062009 |
|
Region A: Residues: [411-465] |
1 11 21 31 41 51
| | | | | |
1 QRVPSSSLPP QELLECKQAK VSMPPSIRIP PSSSALLERT LGVSTNLGDS SISQQ
|
| Detection Method: | |
| Confidence: | 77.39794 |
| Match: | 1ojlA |
| Description: | Crystal structure of a sigma54-activator suggests the mechanism for the conformational switch necessary for sigma54 binding |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [466-696] |
1 11 21 31 41 51
| | | | | |
1 GALPIDGGFS ADRLPLHSSF DGAVATKLDT SLAASQREIG QQGKFSVSML VSPSDNLALA 60
61 KNAKTGASSS GSTIILPLDT ARHSDYLQFG GASNSLQKMD GQKQDHIQSS NIIWSSMPST 120
121 QLPSDTQIHN TQNQRLDSGS FNHNIGAHLA DQTNASASIL PQMKFDTRIS EEKMKQKNTY 180
181 DLGSSKLQGG FNSSGCNFDG LLNSIIKVEK DDLPFMDNEL GCDLFPLGAC I
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
