| Protein: | gi|62734648, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 1071 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|62734648, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
514.0 | [0..4] | [874..183] |
|
|
440.0 | [0..89] | [847..9] |
|
|
439.0 | [0..1] | [800..1] |
|
|
407.0 | [0..74] | [847..18] |
|
Region A: Residues: [1-195] |
1 11 21 31 41 51
| | | | | |
1 MKRPRTTLKS FYAPATPQSN LDPNPPQTAG TGGSNTQQAA AVVEAAIGET GARASNIQVQ 60
61 HAPSTCEAAP SIVETVGSNI PQPEQEPHNS ETVELNPADI VADPGLRKPI EQFHIDIRDA 120
121 VRREYLSRGP CQPIGHKYPQ KLMGNRQRSF HDSWFKMHNW LEYSIAKDAA FCFYCYLFKQ 180
181 PRPDNFGVDA FTSKG
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [196-828] |
1 11 21 31 41 51
| | | | | |
1 FTNWKHATGS FNEHVGKVDS FHNRARKHCE DFKNQRQSVS YKMDSGSKKL EQQYYGRITM 60
61 ILGVVRFLLL QALAFRGHDE SHGSSNKGNF LEMIEWYKEK DKDAQKLLGN SPGNHLLTSP 120
121 KIQKHLCKAC ANKTTKAILK DVGERNFAIL VDESRDASIK EQMAVILRYI NSKGQVIERF 180
181 LGVEHVPDTT SVALKIALDA MIVSHGLSMH KVRGQGYDGA SNMRGEFHGL QRRVLDENPY 240
241 AFYIHCFAHQ LQLVVVSVAK CCSPVSDFFN YTPMIVNTVN GSCKRHDQLA QEHHDNLVSS 300
301 LETGEIFSGR GKNQATNLAR PGDTRWGSHH KTLCRLQHMW KAVLEVLENI CEDNPTTKTT 360
361 ATGLLKQMES FEFVLIMHLM IRLLGKTNDL SQCLQKKDQN IIRAIGLIGT TLQKINHIRQ 420
421 HGWQELFEET KTFCLKYNII VPDMSDTTTT RGRSRGRGGQ LITYQHHFNN EIFNVVHDQL 480
481 IVELNNRFAE RSTQLLRCIA CLDPRNSFAN FDEDKLIELA RMYAADFSPY DCIVLKDQLE 540
541 TFIADVRADP HFLSCSDLGN LAMKMVQSDR HTVFPLVYRL IELALILPVA TATVERAFSA 600
601 MNIIKTELRN KMADEWLNHR VVCYIERDIF ASI
|
| Detection Method: | |
| Confidence: | 28.69897 |
| Match: | 2bw3A |
| Description: | Three-dimensional structure of the Hermes DNA transposase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [829-1071] |
1 11 21 31 41 51
| | | | | |
1 DNDKILTHFQ ELRTRKMKLP LPSAGTYVQV KRSNGRLGVY KEFSNEVSML MLEADPQNAT 60
61 SIYNLHKDAK DKLNKSSMKD AKSLTQTYTS NTSLVAILIA TITFAAAFTL PGGYSSDAGN 120
121 LGFPIMARKF VFQSFLIADT LAMCSSLVVA FICIIARWED LQFLLHYRSF TKKLMWFAYM 180
181 ATTVAFATGL YTVLAPRLLW LAIGICLLSV LLPAITKVIG EWPVLKLRFR LGKTYNSDLL 240
241 DMV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
