| Protein: | gi|115484945, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 1050 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115484945, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
547.0 | [0..179] | [1029..3] |
|
|
529.0 | [0..263] | [1023..7] |
|
|
491.0 | [0..249] | [1023..25] |
|
|
481.0 | [0..204] | [1023..44] |
|
|
475.0 | [0..276] | [1023..55] |
|
Region A: Residues: [1-324] |
1 11 21 31 41 51
| | | | | |
1 MAYLILDVDQ MFQLSGKKVI SDQIVPKISK VLASLRGGPR PGATWAADQV VGRVVMDPPP 60
61 RYTSEILAQG PLNQPNPNSP PQFLRSERQR WESGGVARRL LARGSLLRSY PARQHAGAAA 120
121 RLARRLLGSL GRSLPASALL PPYSSASTPL LIRLPGGQAD STSAPSLGPA VGNEPTTPKG 180
181 QGPRRGFVLM SRAASTGTQI PPQTAGTGGS NTQQAAAVVE AAIGETGARA SNIQVQHAPS 240
241 TCEAAPSIVE TVGSNIPQPE QEPHNSETVE LNPADIVADP GLRKPIEQFH IDIRDAVRRE 300
301 YLSRGPCQPI GHKYPQKLMG NRQR
|
| Detection Method: |  |
| Confidence: | 16.522879 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
|
Region A: Residues: [325-387] |
1 11 21 31 41 51
| | | | | |
1 SFHDSWFKMH NWLEYSIAKD AAFCFYCYLF KQPRPDNFGV DAFTSKGFTN WKHATGSFNE 60
61 HVG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [388-1050] |
1 11 21 31 41 51
| | | | | |
1 KVDSFHNRAR KHCEDFKNQR QSVSYKMDSG SKKLEQQYYG RITMILGVVR FLLLQALAFR 60
61 GHDESHGSSN KGNFLEMIEW YKEKDKDAQK LLGNSPGNHL LTSPKIQKHL CKACANKTTK 120
121 AILKDIGERN FAILVDESRD ASIKEQMAVI LRYINSKGQV IERFLGVEHV PDTTSVALKI 180
181 ALDAMIVSHG LSMHKVRGQG YDGASNMRGE FHGLQRRVLD ENPYAFYIHC FAHQLQLVVV 240
241 SVAKCCSPVS DFFNYTPMIV NTVNGSCKRH DQLAQEHHDN LVSSLETGEI FSGRGKNQAT 300
301 NLARPGDTRW GSHHKTLCRL QHMWKAVLEV LENICEDNPT TKITATGLLK QMESFEFVLI 360
361 MHLMIRLLGK TNDLSQCLQK KDQNIIRAIG LIGTTLQKIN HIRQHGWQEL FEETKTFCLK 420
421 YNIIVPDMSD TTTTRGRSRG RGGQLITYQH HFNNEIFNVV HDQLIVELNN RFAERSTQLL 480
481 RCIACLDPRN SFANFDEDKL IELARMYAAD FSPYDCIVLK DQLETFIADV RADPHFLSCS 540
541 DLGNLAMKMV QSDRHTVFPL VYRLIELALI LPVATATVER AFSAMNIIKT ELRNKMADEW 600
601 LNHRVVCYIE RDIFASIDND KILTHFQELR TRKMKLPLPS GSRSGATIEE FNEDDIDSEE 660
661 DNT
|
| Detection Method: | |
| Confidence: | 53.221849 |
| Match: | 2bw3A |
| Description: | Three-dimensional structure of the Hermes DNA transposase |
Matching Structure (courtesy of the PDB): |
|
