| Protein: | gi|115484405, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 513 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115484405, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
455.0 | [0..1] | [513..1] |
|
Region A: Residues: [1-337] |
1 11 21 31 41 51
| | | | | |
1 MQPDPSGSGG DGNANAKAKL APPPVTAAGG RPVSVLPHKT ANVRDHYRIG KKLGQGQFGT 60
61 TYLCVDKASG GEFACKSIPK RKLLCREDYE DVWREIQIMH HLSEHPNVVR IRGAYEDALF 120
121 VHIVMELCAG GELFDRIVAK GHYTERAAAQ LIRTIVAVVE GCHSLGVMHR DLKPENFLFA 180
181 SAAEDAPLKA TDFGLSMFYK PGDKFSDVVG SPYYVAPEVL QKCYGPESDV WSAGVILYIL 240
241 LCGVPPFWAE TEAGIFRQIL RGKLDFESEP WPSISDSAKD LVRNMLCRDP TKRLTAHEVL 300
301 CHPWIVDDAV APDKPIDSAV LSRLKHFSAM NKLKKMA
|
| Detection Method: |  |
| Confidence: | 73.522879 |
| Match: | 2bdwA |
| Description: | Crystal Structure of the Auto-Inhibited Kinase Domain of Calcium/Calmodulin Activated Kinase II |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [338-513] |
1 11 21 31 41 51
| | | | | |
1 LRVIAESLSE EEIGGLKELF KMIDTDDSGT ITFDELKEGL KRVGSELTEH EIQALMEAAD 60
61 IDNSGTIDYG EFIAATLHMN KLEREENLVS AFSFFDKDGS GFITIDELSQ ACREFGLDDL 120
121 HLEDMIKDVD QNNDGQIDYS EFTAMMRKGN AGGAGRRTMR NSLQLNLGEI LNPSNS
|
| Detection Method: | |
| Confidence: | 27.0 |
| Match: | 1s6iA |
| Description: | Ca2+-regulatory region (CLD) from soybean calcium-dependent protein kinase-alpha (CDPK) in the presence of Ca2+ and the junction domain (JD) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cytoskeletal protein binding | 3.49668552859347 | bayes_pls_golite062009 |
| motor activity | 3.25814691068414 | bayes_pls_golite062009 |
| binding | 3.17556402087346 | bayes_pls_golite062009 |
| tubulin binding | 2.51210014078446 | bayes_pls_golite062009 |
| actin binding | 2.38676888633305 | bayes_pls_golite062009 |
| protein binding | 2.21291432166051 | bayes_pls_golite062009 |
| microtubule binding | 2.17136406283012 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.51057181410195 | bayes_pls_golite062009 |
| kinase activity | 1.48008348280256 | bayes_pls_golite062009 |
| calcium ion binding | 1.40919295397643 | bayes_pls_golite062009 |
| ion binding | 1.36376383271837 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.34982153616582 | bayes_pls_golite062009 |
| cation binding | 1.34827363853601 | bayes_pls_golite062009 |
| metal ion binding | 1.34827363853601 | bayes_pls_golite062009 |
| microfilament motor activity | 1.0725773039399 | bayes_pls_golite062009 |
| transferase activity | 1.00143834284844 | bayes_pls_golite062009 |
| structural constituent of muscle | 0.99845401805886 | bayes_pls_golite062009 |
| actin filament binding | 0.836375875773328 | bayes_pls_golite062009 |
| structural molecule activity | 0.800850121197479 | bayes_pls_golite062009 |
| transporter activity | 0.594904129738596 | bayes_pls_golite062009 |
| transcription regulator activity | 0.450279748770607 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.346694954512987 | bayes_pls_golite062009 |
| actin-dependent ATPase activity | 0.254497017648009 | bayes_pls_golite062009 |
| nucleic acid binding | 0.221865849692192 | bayes_pls_golite062009 |
| myosin binding | 0.125186564742711 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.116648335890738 | bayes_pls_golite062009 |
| DNA binding | 0.0960817636106102 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.0489908313324834 | bayes_pls_golite062009 |
