YRC Public Data Repository - Protein Structure Prediction

Protein:	FZO1_SCHPO
Organism:	Schizosaccharomyces pombe 972h-
Length:	758 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FZO1_SCHPO.

Description	E-value	Query Range	Subject Range
gi\|5441464 - gi\|5441464\|emb\|CAB46694.1\| SPBC1706.03 [Schizosaccharomyces pombe]	357.0	[0..53]	[758..1]
gi\|3850647 - gi\|3850647\|emb\|CAA05705.1\| initiation factor IF2-gamma [Enterobacter cloacae]	316.0	[0..2]	[747..24]
IF2_CHRVO - Translation initiation factor IF-2 OS=Chromobacterium violaceum GN=infB PE=3 SV=1 IF2_CHRVO - Translation initiation factor IF-2 OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM...	315.0	[0..75]	[747..327]
gi\|3850753 - gi\|3850753\|emb\|CAA05699.1\| Initiation factor IF2-beta [Klebsiella oxytoca]	312.0	[0..4]	[747..21]
gi\|91228267, gi\|... - gi\|91228267\|ref\|ZP_01262203.1\| translation initiation factor IF-2 [Vibrio alginolyticus 12G01], gi\|9...	309.0	[0..2]	[747..176]
SO1204 - translation initiation factor IF-2 IF2_SHEON - Translation initiation factor IF-2 OS=Shewanella oneidensis (strain MR-1) GN=infB PE=3 SV=1	308.0	[0..8]	[747..180]
IF2_PASMU - Translation initiation factor IF-2 OS=Pasteurella multocida GN=infB PE=3 SV=1 IF2_PASMU - Translation initiation factor IF-2 OS=Pasteurella multocida (strain Pm70) GN=infB PE=3 SV=1	308.0	[0..1]	[747..112]

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Predicted Domain #1

Region A:
Residues: [1-125]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKSARQLSV AEQNGESGRL NNGYTSNNIQ QYKDETNRHQ FEYNQNRNQL LRSIHIIQNL  60
   61 LNELDNYVDR SDCLFHSVWR TDKEKSKFSG NYYPFSPSKM NVITIDLSLR SSSTADEKLI 120
  121 SQLGE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	39.39794
Match:	2hjgA
Description:	No description for 2hjgA was found.

Predicted Domain #2

Region A:
Residues: [126-758]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EAHESLLKVH IEKANKHLFS LFSRVEDTSS KILITGDLNA GKSTLCNALV HKDILPEDQQ  60
   61 PCTEVFCEVH DAELNDGKDC VHAIPHGLTY SHTDSSTYKV FPIEDLKRLV YETENWSMLI 120
  121 VYVNDGRPAH ESLLHNGITD IALIDAPGLN TDSMKTTSVF ACQEEIDVVV FVVNAENHFT 180
  181 LSATDFLRNA STEKSHIFII VNKFDNIRDK ERCKRLILEQ IHTLSPGTFA DAKDLVHFVS 240
  241 CRVARDPNNR EDALYSSFFQ MENSLRSFIL ENRSKSKLAP VRRYLSGLVG DILNICEYNI 300
  301 KLIDFDINHL QQRLTDLSPK FRKVKHEQQF TYQKNESLVE ATVQSISQHT HSELEDAIDS 360
  361 LGSFASVKYS GFFFAYQYAI SVRDAMQQYL EEKLLESEDY ARKRTEEAVL CIQKDVKDNF 420
  421 DSAVLPVFHA NQMFIKKHRL QLQKHFRFEL GLLDFIDLDL TERLGTWSAS LSTILLVLGK 480
  481 TTPSFTTLGA FTGNLGYPIF KYFQNNSLQH LLVPVLGLAS ICVFGYVIYD IPRALPLKVA 540
  541 EKIKKSLRET DFCHNASIWI GTESRKVLNI PLNDLRRMFH QQWDKQRETI SVAENDLRIC 600
  601 QKARKFFGEI ESRTREAKKK IMMVQLEGCD INY

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	50.09691
Match:	2j68A
Description:	No description for 2j68A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits