| Protein: | gi|60814946 |
| Organism: | synthetic construct |
| Length: | 276 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|60814946.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..276] | [1..276] |
|
|
0.0 | [1..276] | [1..276] |
|
|
0.0 | [1..276] | [1..276] |
|
|
0.0 | [1..276] | [1..277] |
|
|
0.0 | [1..276] | [1..275] |
|
|
0.0 | [1..276] | [1..275] |
|
|
0.0 | [1..276] | [1..276] |
|
Region A: Residues: [1-82] |
1 11 21 31 41 51
| | | | | |
1 MGGLWRPGWR CVPFCGWRWI HPGSPTRAAE RVEPFLRPEW SGTGGAERGL RWLGTWKRCS 60
61 LRARHPALQP PRRPKSSNPF TR
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [83-276] |
1 11 21 31 41 51
| | | | | |
1 AQEEERRRQN KTTLTYVAAV AVGMLGASYA AVPLYRLYCQ TTGLGGSAVA GHASDKIENM 60
61 VPVKDRIIKI SFNADVHASL QWNFRPQQTE IYVVPGETAL AFYRAKNPTD KPVIGISTYN 120
121 IVPFEAGQYF NKIQCFCFEE QRLNPQEEVD MPVFFYIDPE FAEDPRMIKV DLITLSYTFF 180
181 EAKEGHKLPV PGYN
|
| Detection Method: | |
| Confidence: | 63.69897 |
| Match: | 1so9A |
| Description: | Solution Structure of apoCox11, 30 structures |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural molecule activity | 4.47117060684776 | bayes_pls_golite062009 |
| cytochrome-c oxidase activity | 1.63692440621606 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on heme group of donors | 1.63692440621606 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on heme group of donors, oxygen as acceptor | 1.63692440621606 | bayes_pls_golite062009 |
| heme-copper terminal oxidase activity | 1.45348828463274 | bayes_pls_golite062009 |
| binding | 1.26238051646126 | bayes_pls_golite062009 |
| oxidoreductase activity | 1.03472539732492 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 0.401392171756694 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 0.312235007946628 | bayes_pls_golite062009 |
| copper ion binding | 0.19463795974816 | bayes_pls_golite062009 |
| catalytic activity | 0.176396048613815 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 0.0231690475060109 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0170756391184381 | bayes_pls_golite062009 |
