| Protein: | gi|60656551, gi|... |
| Organism: | synthetic construct |
| Length: | 223 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|60656551, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-64 | [1..223] | [1..223] |
|
|
1.0E-62 | [1..222] | [1..222] |
|
|
4.0E-62 | [1..223] | [1..223] |
|
|
2.0E-61 | [1..223] | [1..223] |
|
|
3.0E-61 | [1..222] | [1..224] |
|
|
4.0E-61 | [1..223] | [1..223] |
|
|
3.0E-60 | [1..222] | [1..224] |
|
Region A: Residues: [1-223] |
1 11 21 31 41 51
| | | | | |
1 MNKPLLWISV LTSLLEAFAH TDLSGKVFVF PRESVTDHVN LITPLEKPLQ NFTLCFRAYS 60
61 DLSRAYSLFS YNTQGRDNEL LVYKERVGEY SLYIGRHKVT SKVIEKFPAP VHICVSWESS 120
121 SGIAEFWING TPLVKKGLRQ GYFVEAQPKI VLGQEQDSYG GKFDRSQSFV GEIGDLYMWD 180
181 SVLPPENILS AYQGTPLPAN ILDWQALNYE IRGYVIIKPL VWV
|
| Detection Method: |  |
| Confidence: | 56.522879 |
| Match: | 1gykA |
| Description: | Serum amyloid P component (SAP) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| bacterial cell surface binding | 2.42404943659494 | bayes_pls_golite062009 |
| monosaccharide binding | 2.2299537316674 | bayes_pls_golite062009 |
| carbohydrate binding | 1.90829797790335 | bayes_pls_golite062009 |
| binding | 1.49960529341364 | bayes_pls_golite062009 |
| sugar binding | 1.27754120053722 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 1.02180056687529 | bayes_pls_golite062009 |
| polysaccharide binding | 0.85889680769129 | bayes_pls_golite062009 |
| pattern binding | 0.83687933614214 | bayes_pls_golite062009 |
| heparin binding | 0.831838523439571 | bayes_pls_golite062009 |
| transporter activity | 0.768283508128459 | bayes_pls_golite062009 |
| receptor binding | 0.60563836761885 | bayes_pls_golite062009 |
| extracellular matrix structural constituent | 0.52360080681204 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.508842034055442 | bayes_pls_golite062009 |
| protein binding | 0.501917973797597 | bayes_pls_golite062009 |
| cell surface binding | 0.445616177401277 | bayes_pls_golite062009 |
| unfolded protein binding | 0.434943099544291 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.187717152616782 | bayes_pls_golite062009 |
| nucleic acid binding | 0.171925518657448 | bayes_pls_golite062009 |
