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View Structure Prediction Details

Protein: gi|57238192, gi|...
Organism: Campylobacter jejuni RM1221
Length: 167 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|57238192, gi|....

Description E-value Query
Range
Subject
Range
gi|47125326 - gi|47125326|gb|AAH70494.1| FTH1 protein [Homo sapiens]
192.0 [0..3] [165..63]
gi|114637918 - gi|114637918|ref|XP_001140124.1| PREDICTED: similar to Ferritin heavy chain (Ferritin H subunit) (Pr...
192.0 [0..3] [165..121]
gi|83404987 - gi|83404987|gb|AAI11079.1| Fth1 protein [Rattus norvegicus]
188.0 [0..3] [164..64]

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Predicted Domain #1
Region A:
Residues: [1-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSKEVVKLL NEQINKEMYA ANLYLSMSSW CYENSLDGAG AFLFAHASEE SDHAKKLITY  60
   61 LNETDSHVEL QEVKQPEQNF KSLLDVFEKT YEHEQFITKS INTLVEHMLT HKDYSTFNFL 120
  121 QWYVSEQHEE EALFRGIVDK IKLIGEHGNG LYLADQYIKN IALSRKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.522879
Match: 1krqA
Description: Non-hem ferritin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ferric iron binding 5.55100638826026 bayes_pls_golite062009
iron ion binding 3.10225782829614 bayes_pls_golite062009
cation binding 1.66873432300081 bayes_pls_golite062009
metal ion binding 1.66873432300081 bayes_pls_golite062009
ion binding 1.66140448750278 bayes_pls_golite062009
binding 1.54910183644416 bayes_pls_golite062009
transition metal ion binding 1.51474534368635 bayes_pls_golite062009
protein binding 0.20531413038279 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle