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View Structure Prediction Details

Protein: SRR1L_SCHPO
Organism: Schizosaccharomyces pombe 972h-
Length: 251 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SRR1L_SCHPO.

Description E-value Query
Range
Subject
Range
gi|94376627 - gi|94376627|ref|XP_996537.1| PREDICTED: similar to SRR1-like protein isoform 2 [Mus musculus]
260.0 [0..14] [238..29]
gi|109497535, gi... - gi|109507777|ref|XP_213799.4| PREDICTED: similar to SRR1-like protein [Rattus norvegicus], gi|109497...
257.0 [0..14] [232..46]
gi|45219785, gi|... - gi|61966839|ref|NP_001013716.1| hypothetical protein LOC402055 [Homo sapiens], gi|45219785|gb|AAH669...
236.0 [0..9] [233..37]
gi|220950122, gi... - gi|220960490|gb|ACL92781.1| CG7988-PA [synthetic construct], gi|220950122|gb|ACL87604.1| CG7988-PA [...
CG7988-PA - This gene is referred to in FlyBase by the symbol Dmel\CG7988 (CG7988, FBgn0038582). It is a protein...
235.0 [0..2] [231..7]
gi|109093689 - gi|109093689|ref|XP_001105303.1| PREDICTED: hypothetical protein LOC402055 [Macaca mulatta]
234.0 [0..22] [238..91]
gi|114685600 - gi|114685600|ref|XP_515044.2| PREDICTED: similar to OTTHUMP00000028718 [Pan troglodytes]
232.0 [0..22] [233..48]
gi|73995378 - gi|73995378|ref|XP_543457.2| PREDICTED: similar to SRR1-like protein [Canis familiaris]
218.0 [0..72] [238..73]

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Predicted Domain #1
Region A:
Residues: [1-82]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFIVVKRSR KKKNGRGKFP KVSNTITQGD TDLWSQDTLQ RKLDNSREKL EYSEFLKSVQ  60
   61 SQLSEFKDPI HKCIILGLGR IH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [83-181]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TLTASLQLSL FFEIMKIFNL QPRFCSFYDP AFLKDDVEFL ENKGFCVLPD PPTPSCLKYT  60
   61 LLYMPHCPTS LYETWLAAYV NDDPRHFIMC GNNLQLYVD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [182-251]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NKPSKEIVST YPNVYKMCTK NYYTRLLFPE FPNVYAFNDL SFHFHDAQSF VEKKQPSKFV  60
   61 DASSVAEHPS 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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