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View Structure Prediction Details

Protein: Cp110-PB, FBpp03...
Organism: Drosophila melanogaster
Length: 666 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Cp110-PB, FBpp03....

Description E-value Query
Range
Subject
Range
gi|71980134 - gi|71980134|gb|AAZ57345.1| RE33938p [Drosophila melanogaster]
908.0 [0..1] [666..1]

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Predicted Domain #1
Region A:
Residues: [1-184]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDATWAMEQL LSAVEMGGSH SEATTPTATT TISIWSAPSE GSGSSSMDPV SFRFHLDGQP  60
   61 ILPPLMTSAK KREVQLARQM AEALEKRYRL ARHSAGSDMA SRRSVSQLQQ TETLIYDSTR 120
  121 GQARPQTLVF GKQLPTIQVD PPTPQPFVKS IENTSPRRHN RITDRILQFE QSGLGKLLPK 180
  181 VPDK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [185-389]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CILRTSPAVA EDQQDQDTKD TTARELGSPL AEPANFQRSR SFTLEEPSQV LVEHMEREAL  60
   61 AVKPSQSLAN FEKQTIESQA KRVNRSARSI SSKISHNSYN SNSSAATKST IATKTTTAGS 120
  121 SCSRRDREVE RIIERALDEH GALEASRKAG VRNYLRGHRE RMNQLVIHQE KERRRMQAEF 180
  181 DHQQRQLIEE LCAEIDVSSA TENPD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [390-546]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLISQSTSTG DLQRFSPSPT LPSFSEDIED FPTMEDKCQI AGPSSARKRL FSPKPSKDSE  60
   61 PQLLSAPSTP RSLPLRNSSL TNSRRSVQVV RRRSQSVGGS LVKTITAADR EVKKSPAKPG 120
  121 GGAGRPKSSP GKNSSIIAKR GSAPPKSASP TKRLGNK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [547-666]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YVELKQEERQ WAATRINAGV RGFLVRRLFA TEQVQRIVQT IRDTLIFVLN LHLETCGHGL  60
   61 DAEEPANLRL KARLLQQLCS ASRTLHLIFF QTNIKDRMEI IARDRQRIKT KLLLKHRRLD 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle