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View Structure Prediction Details

Protein: Cp110-PB, FBpp03...
Organism: Drosophila melanogaster
Length: 666 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Cp110-PB, FBpp03....

Description E-value Query
Range
Subject
Range
gi|71980134 - gi|71980134|gb|AAZ57345.1| RE33938p [Drosophila melanogaster]
908.0 [0..1] [666..1]

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Predicted Domain #1
Region A:
Residues: [1-184]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDATWAMEQL LSAVEMGGSH SEATTPTATT TISIWSAPSE GSGSSSMDPV SFRFHLDGQP  60
   61 ILPPLMTSAK KREVQLARQM AEALEKRYRL ARHSAGSDMA SRRSVSQLQQ TETLIYDSTR 120
  121 GQARPQTLVF GKQLPTIQVD PPTPQPFVKS IENTSPRRHN RITDRILQFE QSGLGKLLPK 180
  181 VPDK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [185-389]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CILRTSPAVA EDQQDQDTKD TTARELGSPL AEPANFQRSR SFTLEEPSQV LVEHMEREAL  60
   61 AVKPSQSLAN FEKQTIESQA KRVNRSARSI SSKISHNSYN SNSSAATKST IATKTTTAGS 120
  121 SCSRRDREVE RIIERALDEH GALEASRKAG VRNYLRGHRE RMNQLVIHQE KERRRMQAEF 180
  181 DHQQRQLIEE LCAEIDVSSA TENPD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [390-546]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLISQSTSTG DLQRFSPSPT LPSFSEDIED FPTMEDKCQI AGPSSARKRL FSPKPSKDSE  60
   61 PQLLSAPSTP RSLPLRNSSL TNSRRSVQVV RRRSQSVGGS LVKTITAADR EVKKSPAKPG 120
  121 GGAGRPKSSP GKNSSIIAKR GSAPPKSASP TKRLGNK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [547-666]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YVELKQEERQ WAATRINAGV RGFLVRRLFA TEQVQRIVQT IRDTLIFVLN LHLETCGHGL  60
   61 DAEEPANLRL KARLLQQLCS ASRTLHLIFF QTNIKDRMEI IARDRQRIKT KLLLKHRRLD 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle