YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE39553
Organism: Caenorhabditis elegans
Length: 148 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE39553.

Description E-value Query
Range
Subject
Range
gi|50253123, gi|... - gi|50253123|dbj|BAD29369.1| dTDP-D-glucose 4,6-dehydratase-like [Oryza sativa Japonica Group], gi|50...
254.0 [0..9] [145..169]

Back

Predicted Domain #1
Region A:
Residues: [1-148]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYFNQNGWE NLNVRITLPL SLDLEQPRNL LSKIIKYKEL FDIPVSLTIL PDCMNAMCNL  60
   61 MEQRSGGTLN LVNPEPISLY EVVKIYKEIV DETVNPTSIG VETERAQHLL ATKGNCALDT 120
  121 EKLQSLAPVL SAKQSLIKHF SEMTSAAK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle