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View Structure Prediction Details

Protein: CE39570
Organism: Caenorhabditis elegans
Length: 645 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE39570.

Description E-value Query
Range
Subject
Range
gi|66063, gi|206... - gi|93279231|pdb|2DDH|A Chain A, Crystal Structure Of Acyl-Coa Oxidase Complexed With 3-Oh- Dodecanoa...
538.0 [0..2] [639..20]

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Predicted Domain #1
Region A:
Residues: [1-645]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAQIYGGEM RARRRREITA KLAEIPELHD SMPLPYMTRE EKIMESARKL TVLTQRMSEI  60
   61 IDPTDAGELY HLNNEVLGIE GNPMALHGVM FIPALNAQAS DEQQAKWLIR ALRREIIGTY 120
  121 AQTEMGHGTN LQNLETTATY DIGTQEFVLH TPKITALKWW PGNLGKSSNY AVVVAHMYIK 180
  181 GKNFGPHTFM VPLRDEKTHK PLPGITIGDI GPKMAYNIVD NGFLGFNNYR IPRTNLLMRH 240
  241 TKVEADGTYI KPPHAKINYS AMVHVRSYML TGQAIMLSYA LNIATRYSAV RRQGQIDKNE 300
  301 PEVKVLEYQT QQHRLFPFIA RAYAFQFAGA ETVKLYERVL KEMKSGNVSL MADLHALTSG 360
  361 LKSVVTHQTG EGIEQARMAC GGHGYSMASY ISEIYGVAIG GCTYEGENMV MLLQLARYLV 420
  421 KSAALVKSGK ASQLGPLVAY LGARSEPTSL IDRVPNGGIT EYIKTFQHIA KRQTLKAANK 480
  481 FFGLMENGEK REIAWNKSSV ELNRASRLHT RLFIVEAFAR RVNEIGDITI KEALSDLLHL 540
  541 HVNYELLDVA TYALEDGFMS STQLDYVRDQ LYFYLQKIRP NAVSLLDSWE FSDRELRSVL 600
  601 GRRDGHVYEN LFKWAKESPL NKTDVLPSVD TYLKPMMEKA RQSKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 153.0
Match: 1is2A
Description: Peroxisomal acyl-CoA oxidase-II, domains 3 and 4; Peroxisomal acyl-CoA oxidase-II, domains 1 and 2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
acyl-CoA oxidase activity 7.85164875699474 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors 7.69964776555327 bayes_pls_golite062009
acyl-CoA dehydrogenase activity 6.0252876667118 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor 5.50948952617422 bayes_pls_golite062009
palmitoyl-CoA oxidase activity 5.41720462605663 bayes_pls_golite062009
oxidoreductase activity 3.99827953439804 bayes_pls_golite062009
catalytic activity 2.41506805547596 bayes_pls_golite062009
pristanoyl-CoA oxidase activity 2.26651221125135 bayes_pls_golite062009
long-chain-acyl-CoA dehydrogenase activity 0.13696326544237 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle