| Protein: | CE39380 |
| Organism: | Caenorhabditis elegans |
| Length: | 412 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE39380.
| Description | E-value | Query Range |
Subject Range |
|
|
287.0 | [0..1] | [411..458] |
|
Region A: Residues: [1-92] |
1 11 21 31 41 51
| | | | | |
1 MLGDIQKGRI DMACGRFRMT ADRANVLTFT YPTQFEVNQV YLITDPQKSV DVVFLFHPFS 60
61 TTVWLLLSLT VLVVAIVFFI LRFVEFKSTK ET
|
| Detection Method: |  |
| Confidence: | 8.39794 |
| Match: | 1gggA |
| Description: | Glutamine-binding protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.144254316055515 | bayes_pls_golite062009 |
|
Region A: Residues: [93-155] |
1 11 21 31 41 51
| | | | | |
1 ESSYECIQNS IFQVLLSTFN LEIRVAKKST FFAFHLFSTI WLLAWFHVFI DFYTSELSGM 60
61 MVV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [156-347] |
1 11 21 31 41 51
| | | | | |
1 SDKRQVPFDN FYGFIDHLRK GNYRLFTPSA DRIPECPHEI TTSKCNAIFS EILSKHPPEY 60
61 GDLMQLNDRE FVSSRKIPLV GFGWYPAQRI SSKFSIWTEE LFHSDIWLIR DFPVCPAAYI 120
121 VRPTFPYLDE LNEMIIKRID NHYTPAYPEL TLTGKPSKSS FSLNQLSSIF LIHLLGAFVS 180
181 TLFLIAELVI GK
|
| Detection Method: | |
| Confidence: | 18.69897 |
| Match: | 1yaeA |
| Description: | Structure of the Kainate Receptor Subunit GluR6 Agonist Binding Domain Complexed with Domoic Acid |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [348-412] |
1 11 21 31 41 51
| | | | | |
1 TDFLTHIVVF YRTLNLDYGK IFFFPINVSS SYGSYFSAEL TKRHNIDSTL QTRLDNSKSL 60
61 KMENG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
