YRC Public Data Repository - Protein Structure Prediction

Protein:	DAD3_DEBHA
Organism:	Debaryomyces hansenii
Length:	143 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DAD3_DEBHA.

Description	E-value	Query Range	Subject Range
gi\|39978223, gi\|... - gi\|39978223\|ref\|XP_370499.1\| hypothetical protein MG06996.4 [Magnaporthe grisea 70-15], gb\|EAA55339....	113.0	[0..3]	[116..57]
gi\|46107530, gi\|... - gi\|46107530\|ref\|XP_380824.1\| hypothetical protein FG00648.1 [Gibberella zeae PH-1], gi\|42545535\|gb\|E...	99.0	[0..3]	[98..15]
gi\|169775255 - gi\|169775255\|ref\|XP_001822095.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|83769958 - gi\|83769958\|dbj\|BAE60093.1\| unnamed protein product [Aspergillus oryzae]	95.0	[0..2]	[94..25]
DAD3_ASHGO - DASH complex subunit DAD3 OS=Ashbya gossypii GN=DAD3 PE=3 SV=1 DAD3_ASHGO - DASH complex subunit DAD3 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-10...	94.0	[0..3]	[102..5]
gi\|85080092 - gi\|85080092\|ref\|XP_956477.1\| hypothetical protein NCU01799 [Neurospora crassa OR74A] gi\|28917543, gi\|... - gi\|32415517\|ref\|XP_328238.1\| predicted protein [Neurospora crassa], gi\|28917543\|gb\|EAA27241.1\| conse...	92.0	[0..3]	[96..17]
gi\|67515723, gi\|... - gi\|67515723\|ref\|XP_657747.1\| hypothetical protein AN0143.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	92.0	[0..2]	[94..37]
gi\|114195380, gi... - gi\|115387581\|ref\|XP_001211296.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	92.0	[0..2]	[94..88]
DAD3_KLULA - DASH complex subunit DAD3 OS=Kluyveromyces lactis GN=DAD3 PE=3 SV=1 DAD3_KLULA - DASH complex subunit DAD3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 12...	89.0	[0..3]	[99..5]
DAD3 - Essential subunit of the Dam1 complex (aka DASH complex), couples kinetochores to the force produced... gi\|151946619 - gi\|151946619\|gb\|EDN64841.1\| duo1 and dam1 interacting protein [Saccharomyces cerevisiae YJM789] gi\|190408617 - gi\|190408617\|gb\|EDV11882.1\| DASH complex subunit DAD3 [Saccharomyces cerevisiae RM11-1a] DAD3_YEAST - DASH complex subunit DAD3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAD3 PE=1 SV=1	89.0	[0..3]	[100..5]
gi\|169623494, gi... - gi\|169623494\|ref\|XP_001805154.1\| hypothetical protein SNOG_14989 [Phaeosphaeria nodorum SN15], gi\|11...	89.0	[0..3]	[98..22]

Back

Predicted Domain #1

Region A:
Residues: [1-143]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLSPIEAQI LSQYQLLAVQ LNTLSSEVKQ LNSTTNQNSR PSGKSSSSED GVEATNSGSA  60
   61 DKLLDNLRNL EMKIGLVYTL FKGAVYSLFL QYEEDQNLKN DEEQRRNDDS DEEPQNHHEI 120
  121 DAIEGENNDD MGDRMELQEN HGH

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	19.39794
Match:	PF08656.1
Description:	No description for PF08656.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.408003143965018	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: