| Protein: | ceh-8 |
| Organism: | Caenorhabditis elegans |
| Length: | 276 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ceh-8.
| Description | E-value | Query Range |
Subject Range |
|
|
130.0 | [0..3] | [274..176] |
|
Region A: Residues: [1-129] |
1 11 21 31 41 51
| | | | | |
1 MSNPTDNNSA TSSITPNFSA FSSFTTYKPS DSFSSFESDS SPSKSSSSRK NRDKIADKKQ 60
61 RRNRTTFTTF QLHALEAAFD KTHYPDVYAR ETLAAKVQLP EVRVQVWFQN RRAKFRRQEK 120
121 QDCQGEEKH
|
| Detection Method: |  |
| Confidence: | 25.0 |
| Match: | 1fjlA |
| Description: | Paired protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.25140430108186 | bayes_pls_golite062009 |
| transcription regulator activity | 0.993707936114837 | bayes_pls_golite062009 |
| DNA binding | 0.817622981651434 | bayes_pls_golite062009 |
| nucleic acid binding | 0.578037557340686 | bayes_pls_golite062009 |
| transcription factor activity | 0.49956799334009 | bayes_pls_golite062009 |
| protein binding | 0.134872960372588 | bayes_pls_golite062009 |
|
Region A: Residues: [130-276] |
1 11 21 31 41 51
| | | | | |
1 SLKDTMPSWS WMSENKTDTP PMLPPANTLS STHNNGISDE FFKTSEGKEV YGFPFAEYGT 60
61 PADNTHVSKT GNVFHLNFED SDKKSMKKES PQTPSTSSPF ISEYHPPFIP YYIPNQSFSN 120
121 AFNQYPMPFP YPIHFEPPQL THSQENC
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
