| Protein: | spe-10 |
| Organism: | Caenorhabditis elegans |
| Length: | 351 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for spe-10.
| Description | E-value | Query Range |
Subject Range |
|
|
241.0 | [0..7] | [332..9] |
|
Region A: Residues: [1-106] |
1 11 21 31 41 51
| | | | | |
1 MSWYSKIYVA VREYRAKHKI TGWILTRCLN VLLFIQLILL WWSLYMYVTV TIGYYVQSTI 60
61 QATIYLIVGS FLFVMSMWSL AKTLFTRVGR VPERYRPSKE LEDRLK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [107-228] |
1 11 21 31 41 51
| | | | | |
1 AVTPMEKNRY VVEKSTPEQL AQQNTILEEM CTYCKVVVAE CDQVGRLKYC YECGHIKPDR 60
61 ARHCSSCGKC CIKYDHHCPW INMCVTHVNY KYFLLYIIYT SFLVYWYLLT SLEGAVRYFI 120
121 NQ
|
| Detection Method: | |
| Confidence: | 1.06 |
| Match: | 1zbdB |
| Description: | Effector domain of rabphilin-3a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.74162696425053 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 1.04657643096144 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 1.04657643096144 | bayes_pls_golite062009 |
| protein binding | 0.973857285696821 | bayes_pls_golite062009 |
| phosphoinositide binding | 0.294734730910542 | bayes_pls_golite062009 |
| phospholipid binding | 0.100740657905053 | bayes_pls_golite062009 |
| nucleic acid binding | 0.0747711402215409 | bayes_pls_golite062009 |
|
Region A: Residues: [229-351] |
1 11 21 31 41 51
| | | | | |
1 QWTDELGKFL FYLFSFIVGG VFGYYPLGEL IIFHYQLISL NETTVEQTKP ALLRFDNAAD 60
61 YNMGKYNNFQ SVFGWGLWLC PIDSSTQDGL HFDIRYVNTQ QRNRFVRIEE EPSSTQSSQS 120
121 SIQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
