| Protein: | twk-9 |
| Organism: | Caenorhabditis elegans |
| Length: | 568 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for twk-9.
| Description | E-value | Query Range |
Subject Range |
|
|
203.0 | [0..142] | [559..248] |
|
Region A: Residues: [1-406] |
1 11 21 31 41 51
| | | | | |
1 MKCSFHIPEK YQWASTLFVH VALIAGVAVY TVFGALSMQW LESPDRVRAL LKRELKPVES 60
61 LPPPPSISGL PDRITRVYLG EELAILDPGV HECLERTILT LFHDTKCDPY SFEHLNIELI 120
121 DRCYAEANVP IPEGYGGQPR KKIKNKEEEK DVIDETPAEK WSIGNSVIFA FTVITTIGYG 180
181 HVAPETFEGR LFLIFYGVIG VPFTLLTIAD LGMFLTRFLK NLLTMARRFA HYLVKLYQKA 240
241 KKQRNKSQKT SPVMPDSERS EVWNTGKEMK EMSMRTAREP GEGDEIEVIE NGNDENGKEE 300
301 DEEEPENNEP RKTEESIALG ITFTCYLVAG AKILSVYEPE MDFFKALYFN FVTLTTIGLG 360
361 DFVPKSFDYL LITLIYIGIG LALTTMAIEI AADLLKKLHY IGRKME
|
| Detection Method: |  |
| Confidence: | 26.0 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [407-568] |
1 11 21 31 41 51
| | | | | |
1 NVGQAVVWFG GKKMTMKSLV KHLGDQFNIP EEELANFDMS AFVDNAIKVE KGEIATLRKP 60
61 PTPPVVFRER AFSFSNVRNS SESALKYVDD NRFSKTTQPT IYTVIIHETT RTIDTLHNLA 120
121 DAIRRDPSIP RLDLDVHYLT DMSAPTSFDE NYLRTYTNAR RK
|
| Detection Method: | |
| Confidence: | 17.045757 |
| Match: | 2q0aA |
| Description: | No description for 2q0aA was found. |
