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View Structure Prediction Details

Protein: acbp-7
Organism: Caenorhabditis elegans
Length: 219 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acbp-7.

Description E-value Query
Range
Subject
Range
gi|39591540, gi|... - gi|39591540|emb|CAE71116.1| Hypothetical protein CBG17969 [Caenorhabditis briggsae], gi|187025035|em...
gi|157775113 - gi|157775113|ref|XP_001665622.1| hypothetical protein CBG17969 [Caenorhabditis briggsae AF16]
219.0 [0..1] [214..1]

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Predicted Domain #1
Region A:
Residues: [1-72]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFMWRTLLL TAVLFISITS ACNKNGEGCL LMRNVLRDPL RLSTWKVSSL NRAINQLQAY  60
   61 QQLFHEDKRS SD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [73-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YGPLSEMIRR RRRMENALED FKRIRAQFVQ RKVLKYEFEL FTKFENHTRH VWGLYQQAIV  60
   61 GDVNVPKLNY MEIDEGEKSW MWRWINGNEK WHAWNKCRGL TKEEASEQYV EAVQKLKIDI 120
  121 QQLLINWKIE ISNEPTAAMN NNINNIA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.0
Match: 2fj9A
Description: No description for 2fj9A was found.

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