| Protein: | oct-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 585 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
|
Region A: Residues: [1-115] |
1 11 21 31 41 51
| | | | | |
1 MSFQAMETFA EISQEILMSA TKPPDFDFVL EQVGNYGTYQ IVFFFIICLP TSLPSAFSAF 60
61 NIPFVVGNPP HTCHIPEGKE YLRPLTNDTQ ILSCKQYNET QINVFRAFTS APVDT
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [116-585] |
1 11 21 31 41 51
| | | | | |
1 YSDRISLVPC QNGWDYDNST YLDSLVTEFN LVCDQQAWIE ISTTSFYVGS FIGNCLFGYV 60
61 ADKFGRRRSF FVILTVLIVC GTASSFAKDI ESFIILRFFT GLAFPALFQI PFIICMEFMG 120
121 NSGRIFSGLM TSLFFGAAMA LLGVVAMFIR RWRQLTFFCN APFAFYIIYY FFLPESPRWS 180
181 VSVGKWADAK KQLKKIAKMN GKSNVDVDEL VDSMKNHQNA AEEKETKRSH NVTDLFKTPN 240
241 LRRKTLIVTY IWVMNAIIYN GLTLNVSNLP VDDYWSFIIN GAVELPGYFV VWPLLQCAGR 300
301 RWTLAATMIV CGIGCVSAMF MPDGYPWLVA SASFIGKFGV GSGFAVIYIF AGELYPTVVR 360
361 AIGMGMSSMV AGSGLLLAPH IVNLGKIVKI LPLLIMGLMA LSAGILTFFL PETLGAPLPM 420
421 TIEDAENFGK KPEPDSGMFT QAAKKRESQP LLEPHTPMDR RRRSSRLMNI
|
| Detection Method: | |
| Confidence: | 30.69897 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| substrate-specific transmembrane transporter activity | 5.46247398538901 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 4.58978526526921 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 4.31967711223954 | bayes_pls_golite062009 |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 3.94605227012838 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| organic anion transmembrane transporter activity | 3.3413526350788 | bayes_pls_golite062009 |
| inorganic anion transmembrane transporter activity | 3.21476253433572 | bayes_pls_golite062009 |
| hexose phosphate transmembrane transporter activity | 2.87308506088228 | bayes_pls_golite062009 |
| glucose-6-phosphate transmembrane transporter activity | 2.87308506088228 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
| binding | 1.89539096965643 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| phosphate transmembrane transporter activity | 1.47932844880848 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
