| Protein: | gi|240849537, gi... |
| Organism: | Homo sapiens |
| Length: | 839 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|240849537, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..839] | [1..839] |
|
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0.0 | [1..839] | [1..839] |
|
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0.0 | [1..839] | [1..839] |
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|
0.0 | [25..839] | [1..836] |
|
Region A: Residues: [1-115] |
1 11 21 31 41 51
| | | | | |
1 MGWVGGRRRD SASPPGRSRS AADDINPAPA NMEGGGGSVA VAGLGARGSG AAAATVRELL 60
61 QDGCYSDFLN EDFDVKTYTS QSIHQAVIAE QLAKLAQGIS QLDRELHLQV VARHE
|
| Detection Method: |  |
| Confidence: | 6.0 |
| Match: | 1dg3A |
| Description: | Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [116-467] |
1 11 21 31 41 51
| | | | | |
1 DLLAQATGIE SLEGVLQMMQ TRIGALQGAV DRIKAKIVEP YNKIVARTAQ LARLQVACDL 60
61 LRRIIRILNL SKRLQGQLQG GSREITKAAQ SLNELDYLSQ GIDLSGIEVI ENDLLFIARA 120
121 RLEVENQAKR LLEQGLETQN PTQVGTALQV FYNLGTLKDT ITSVVDGYCA TLEENINSAL 180
181 DIKVLTQPSQ SAVRGGPGRS TMPTPGNTAA LRASFWTNME KLMDHIYAVC GQVQHLQKVL 240
241 AKKRDPVSHI CFIEEIVKDG QPEIFYTFWN SVTQALSSQF HMATNSSMFL KQAFEGEYPK 300
301 LLRLYNDLWK RLQQYSQHIQ GNFNASGTTD LYVDLQHMED DAQDIFIPKK PD
|
| Detection Method: | |
| Confidence: | 17.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [468-634] |
1 11 21 31 41 51
| | | | | |
1 YDPEKALKDS LQPYEAAYLS KSLSRLFDPI NLVFPPGGRN PPSSDELDGI IKTIASELNV 60
61 AAVDTNLTLA VSKNVAKTIQ LYSVKSEQLL STQGDASQVI GPLTEGQRRN VAVVNSLYKL 120
121 HQSVTKAIHA LMENAVQPLL TSVGDAIEAI IITMHQEDFS GSLSSSG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [635-751] |
1 11 21 31 41 51
| | | | | |
1 KPDVPCSLYM KELQGFIARV MSDYFKHFEC LDFVFDNTEA IAQRAVELFI RHASLIRPLG 60
61 EGGKMRLAAD FAQMELAVGP FCRRVSDLGK SYRMLRSFRP LLFQASEHVA SSPALGD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [752-839] |
1 11 21 31 41 51
| | | | | |
1 VIPFSIIIQF LFTRAPAELK SPFQRAEWSH TRFSQWLDDH PSEKDRLLLI RGALEAYVQS 60
61 VRSREGKEFA PVYPIMVQLL QKAMSALQ
|
| Detection Method: | |
| Confidence: | 0.975 |
| Match: | 1sv0A |
| Description: | Crystal Structure Of Yan-SAM/Mae-SAM Complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.76553673800266 | bayes_pls_golite062009 |
| protein binding | 1.96434025125047 | bayes_pls_golite062009 |
| transcription regulator activity | 1.82619147445372 | bayes_pls_golite062009 |
| DNA binding | 1.40903533329696 | bayes_pls_golite062009 |
| nucleic acid binding | 1.38211918800351 | bayes_pls_golite062009 |
| transcription factor activity | 1.05134679312138 | bayes_pls_golite062009 |
| sphingomyelin synthase activity | 0.826637723127231 | bayes_pls_golite062009 |
| ceramide cholinephosphotransferase activity | 0.826637723127231 | bayes_pls_golite062009 |
| transcription repressor activity | 0.715530371553761 | bayes_pls_golite062009 |
| catalytic activity | 0.0823489300960689 | bayes_pls_golite062009 |
