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View Structure Prediction Details

Protein: gi|30248854, gi|...
Organism: Nitrosomonas europaea ATCC 19718
Length: 224 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30248854, gi|....

Description E-value Query
Range
Subject
Range
gi|68342728, gi|... - gi|70728429|ref|YP_258178.1| carboxylesterase [Pseudomonas fluorescens Pf-5], gi|68342728|gb|AAY9033...
146.0 [0..9] [224..3]

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Predicted Domain #1
Region A:
Residues: [1-224]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDNSFQLSA IDITTGSNPE YTILWMHGLG ADGNDFVPVV QALDLPEIPI RFLFPHAPQQ  60
   61 PVTINSGYIM RAWYDIQHTD FVEQEDETGI RRSQHAIVEL IEREDRRGIP PDHLILAGFS 120
  121 QGAAMALHTG LRHPDRLAGI IALSGYLPLA HKIEREAHIT NRITPIFMAH GNDDPIVPIE 180
  181 LAHASLQQLR EYYYPVTWHE YPMEHTVCDQ ELVDISRWLK TILK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.522879
Match: 1auoA
Description: Carboxylesterase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 1.75934962198703 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 1.09488027320166 bayes_pls_golite062009
lipase activity 0.849473630399459 bayes_pls_golite062009
carboxylesterase activity 0.424330502936163 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle