YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: NDUA7_BOVIN
Organism: Bos taurus
Length: 113 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NDUA7_BOVIN.

Description E-value Query
Range
Subject
Range
NDUA7_MOUSE - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 OS=Mus musculus GN=Ndufa7 PE=1 SV=3
183.0 [0..1] [113..1]
gi|81294173 - gi|81294173|gb|AAI07893.1| NDUFA7 protein [Homo sapiens]
183.0 [0..1] [113..9]
gi|111662311 - gi|111662311|gb|ABH12236.1| mitochondrial complex I subunit NDUFA7 [Gorilla gorilla]
181.0 [0..1] [113..6]
gi|111662313 - gi|111662313|gb|ABH12237.1| mitochondrial complex I subunit NDUFA7 [Pongo pygmaeus]
181.0 [0..1] [113..6]
NDUA7_GORGO - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 OS=Gorilla gorilla gorilla GN=NDUFA7 PE...
180.0 [0..1] [113..1]
gi|149031651, gi... - gi|27717677|ref|XP_216859.1| PREDICTED: similar to NADH dehydrogenase (ubiquinone) 1 alpha subcomple...
177.0 [0..1] [113..1]

Back

Predicted Domain #1
Region A:
Residues: [1-113]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASATRFIQW LRNWASGRDL QAKLQLRYQE ISKRTQPPPK LPVGPSHKLS NNYYCTRDGR  60
   61 REAMPPSIVM SSQKVLVAGK PAESSAVAAS EKKAVSPAPP IKRWELSQDE PYL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 73.638272
Match: PF07347.3
Description: No description for PF07347.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted functions:

Term Confidence Notes
oxidoreductase activity, acting on NADH or NADPH 6.85071895867857 bayes_pls_golite062009
NADH dehydrogenase activity 5.04778864478836 bayes_pls_golite062009
NADH dehydrogenase (ubiquinone) activity 4.37566365351249 bayes_pls_golite062009
NADH dehydrogenase (quinone) activity 3.93452395193664 bayes_pls_golite062009
oxidoreductase activity 3.89925600646862 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor 3.60394725496916 bayes_pls_golite062009
binding 1.53971942914217 bayes_pls_golite062009
electron carrier activity 1.12409743421897 bayes_pls_golite062009
protein binding 0.754626880818103 bayes_pls_golite062009
catalytic activity 0.249857919494411 bayes_pls_golite062009
cytochrome-c oxidase activity 0.134014583616227 bayes_pls_golite062009
oxidoreductase activity, acting on heme group of donors 0.134014583616227 bayes_pls_golite062009
oxidoreductase activity, acting on heme group of donors, oxygen as acceptor 0.134014583616227 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle