| Protein: | BPE_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 343 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BPE_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
200.0 | [0..1] | [318..1] |
|
|
146.0 | [0..17] | [303..304] |
|
|
142.0 | [0..2] | [320..283] |
|
|
140.0 | [0..2] | [303..283] |
|
Region A: Residues: [1-122] |
1 11 21 31 41 51
| | | | | |
1 MDPSGMMNEG GPFNLAEIWQ FPLNGVSTAG DSSRRSFVGP NQFGDADLTT AANGDPARMS 60
61 HALSQAVIEG ISGAWKRRED ESKSAKIVST IGASEGENKR QKIDEVCDGK AEAESLGTET 120
121 EQ
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [123-220] |
1 11 21 31 41 51
| | | | | |
1 KKQQMEPTKD YIHVRARRGQ ATDSHSLAER ARREKISERM KILQDLVPGC NKVIGKALVL 60
61 DEIINYIQSL QRQVEFLSMK LEAVNSRMNP GIEVFPPK
|
| Detection Method: | |
| Confidence: | 15.0 |
| Match: | 1nkpA |
| Description: | Myc prot-oncogene protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [221-343] |
1 11 21 31 41 51
| | | | | |
1 EVMILMIINS IFSIFFTKQY MFLSRYSRGR SLDVYAVRSF KHCNKRSDLC FCSCSPKTEL 60
61 KTTIFSQNMT CFCRYSRVGV AISSSKHCNE PVTLCFYSYC LRKIYHFLLW NLKYKIQKSV 120
121 LFS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.821 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.683 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.645 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.645 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.635 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.629 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.629 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.624 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.624 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.622 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
