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View Structure Prediction Details

Protein: FES1_ARATH
Organism: Arabidopsis thaliana
Length: 587 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FES1_ARATH.

Description E-value Query
Range
Subject
Range
C3H38_ARATH - Zinc finger CCCH domain-containing protein 38 OS=Arabidopsis thaliana GN=At3g18640 PE=2 SV=1
231.0 [0..96] [586..214]
gi|114645167 - gi|114645167|ref|XP_509017.2| PREDICTED: splicing factor, arginine/serine-rich 2, interacting protei...
227.0 [0..119] [585..1045]
gi|46200522 - gi|46200522|gb|AAS82598.1| hypothetical protein S250_18C08.12 [Sorghum bicolor]
214.0 [0..91] [578..289]
gi|50728238 - gi|50728238|ref|XP_416047.1| PREDICTED: similar to splicing factor, arginine/serine-rich 2, interact...
212.0 [0..120] [585..987]
gi|109096230 - gi|109096230|ref|XP_001093213.1| PREDICTED: similar to splicing factor, arginine/serine-rich 2, inte...
209.0 [0..119] [585..1036]
gi|73997071 - gi|73997071|ref|XP_534828.2| PREDICTED: similar to splicing factor, arginine/serine-rich 2, interact...
207.0 [0..119] [585..1168]

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Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDSDMDIDD DEVEQKVQVH TIVRESELFD KPPIQASNSH NDVKRHSVTT PLDEQSKIIK  60
   61 EQAFAQDNGT LPRFPAPGIP 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [81-211]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRSFFTGGGG NEPEQKRAAL PCKFFAKGWC FNGVSCKFLH VKENSNCTSQ QLAENSMAGN  60
   61 GGIRSDLERR ILDSREGVRV SQLSENGVTS LPTREDISFM NPQRVFSSMS FVNPPGSQRV 120
  121 FPFNNEMRFM P

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.49
Match: 2cqeA
Description: Solution Structure of the Zinc-finger domain in KIAA1064 protein
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [212-273]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SFENIRRESL KQTYGADFTD NRSLVINNAN SFALRSSFVH EHRPSISSYL KTDMGSAGPA  60
   61 WT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [274-497]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSLSSSVPMN DRASTVGDFE NGNSLSGSGS LPTLQGVAVS SDKGAEANTT STKKKVSSDD  60
   61 WEPSEPFKAS FTIPPYILPS SDALYDPFTD IENLGDRPLN DSLSSKGEHA RKSSCQQKDG 120
  121 DSASGPQARD CKNDDKSSSC SQNQHQETVA RSLEAHGVVE GVATSVVDQN DTATPSKEIS 180
  181 SATAAENRVV LKRIKPAGHD SWHRSDGSSY KKTKKSDEID GEVR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.30103
Match: 1m2vB
Description: Sec24
Matching Structure (courtesy of the PDB):

Predicted Domain #5
Region A:
Residues: [498-587]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDAGMKVMRL FRTAVVETIK EMLKPLWREG RLTKDVHNMI VKKAAEKVVG AAVQFHQVPT  60
   61 DTESVDQYLG LSGTRIVKLV EGYVEKYGKP 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.07
Match: 2c5zA
Description: Structure and CTD binding of the Set2 SRI domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle