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View Structure Prediction Details

Protein: FES1_ARATH
Organism: Arabidopsis thaliana
Length: 587 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FES1_ARATH.

Description E-value Query
Range
Subject
Range
C3H38_ARATH - Zinc finger CCCH domain-containing protein 38 OS=Arabidopsis thaliana GN=At3g18640 PE=2 SV=1
231.0 [0..96] [586..214]
gi|114645167 - gi|114645167|ref|XP_509017.2| PREDICTED: splicing factor, arginine/serine-rich 2, interacting protei...
227.0 [0..119] [585..1045]
gi|46200522 - gi|46200522|gb|AAS82598.1| hypothetical protein S250_18C08.12 [Sorghum bicolor]
214.0 [0..91] [578..289]
gi|50728238 - gi|50728238|ref|XP_416047.1| PREDICTED: similar to splicing factor, arginine/serine-rich 2, interact...
212.0 [0..120] [585..987]
gi|109096230 - gi|109096230|ref|XP_001093213.1| PREDICTED: similar to splicing factor, arginine/serine-rich 2, inte...
209.0 [0..119] [585..1036]
gi|73997071 - gi|73997071|ref|XP_534828.2| PREDICTED: similar to splicing factor, arginine/serine-rich 2, interact...
207.0 [0..119] [585..1168]

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Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDSDMDIDD DEVEQKVQVH TIVRESELFD KPPIQASNSH NDVKRHSVTT PLDEQSKIIK  60
   61 EQAFAQDNGT LPRFPAPGIP 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.675 a.118.1 ARM repeat
View Download 0.444 d.374.1 Description not found.
View Download 0.377 d.58.17 Metal-binding domain
View Download 0.346 a.68.1 Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
View Download 0.346 a.68.1 Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
View Download 0.344 d.58.40 D-ribose-5-phosphate isomerase (RpiA), lid domain
View Download 0.341 a.240.1 Description not found.
View Download 0.340 d.74.1 Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH)
View Download 0.324 d.58.49 YajQ-like
View Download 0.320 a.4.1 Homeodomain-like
View Download 0.303 a.118.1 ARM repeat
View Download 0.295 d.58.3 Protease propeptides/inhibitors
View Download 0.295 d.58.3 Protease propeptides/inhibitors

Predicted Domain #2
Region A:
Residues: [81-211]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRSFFTGGGG NEPEQKRAAL PCKFFAKGWC FNGVSCKFLH VKENSNCTSQ QLAENSMAGN  60
   61 GGIRSDLERR ILDSREGVRV SQLSENGVTS LPTREDISFM NPQRVFSSMS FVNPPGSQRV 120
  121 FPFNNEMRFM P

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.49
Match: 2cqeA
Description: Solution Structure of the Zinc-finger domain in KIAA1064 protein
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [212-273]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SFENIRRESL KQTYGADFTD NRSLVINNAN SFALRSSFVH EHRPSISSYL KTDMGSAGPA  60
   61 WT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [274-497]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSLSSSVPMN DRASTVGDFE NGNSLSGSGS LPTLQGVAVS SDKGAEANTT STKKKVSSDD  60
   61 WEPSEPFKAS FTIPPYILPS SDALYDPFTD IENLGDRPLN DSLSSKGEHA RKSSCQQKDG 120
  121 DSASGPQARD CKNDDKSSSC SQNQHQETVA RSLEAHGVVE GVATSVVDQN DTATPSKEIS 180
  181 SATAAENRVV LKRIKPAGHD SWHRSDGSSY KKTKKSDEID GEVR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.30103
Match: 1m2vB
Description: Sec24
Matching Structure (courtesy of the PDB):

Predicted Domain #5
Region A:
Residues: [498-587]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDAGMKVMRL FRTAVVETIK EMLKPLWREG RLTKDVHNMI VKKAAEKVVG AAVQFHQVPT  60
   61 DTESVDQYLG LSGTRIVKLV EGYVEKYGKP 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.07
Match: 2c5zA
Description: Structure and CTD binding of the Set2 SRI domain
Matching Structure (courtesy of the PDB):

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