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View Structure Prediction Details

Protein: UBC24_ARATH
Organism: Arabidopsis thaliana
Length: 907 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for UBC24_ARATH.

Predicted Domain #1
Region A:
Residues: [1-190]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMSLTDSDW DSSSDSGSSE HEEVEFSYGG RAQNIFSNLE ETIGKIDEFL SFERGFMYGD  60
   61 IVRSATEPSG QSGRVINIDM FVNLESTHGK IMKEVDTKRL QKLRSISLSD YVINGPWVGR 120
  121 VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST 180
  181 TWLCGTWRGT 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [191-411]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QVMGTVCTVE AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI  60
   61 LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK TKMKVAVMWQ 120
  121 DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI 180
  181 QVEKEATGCV DEVMEEIVSA YELLEHPDFG FCFSDVVVKL L

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [412-587]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PEGKFDPNAD TIVATEAKHL LTESDYSGAY FLSSIGVVTG FKNGSVKVKW ANGSTSKVAP  60
   61 CEIWKMERSE YSNSSTVSSE GSVQDLSQKI SQSDEASSNH QETGLVKLYS VGESCNENIP 120
  121 ECSSFFLPKA AIGFITNLAS SLFGYQGSTS VISSHSRCND SEDQSDSEVL VQETAE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [588-907]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SYDNSETNSG EVDMTTTMVN IPIEGKGINK TLDSTLLENS RNQVRFRQFD MVNDCSDHHF  60
   61 LSSDKGLAQS QVTKSWVKKV QQEWSNLEAN LPNTIYVRVC EERMDLLRAA LVGAPGTPYH 120
  121 DGLFFFDIML PPQYPHEPPM VHYHSGGMRL NPNLYESGRV CLSLLNTWSG SGTEVWNAGS 180
  181 SSILQLLLSF QALVLNEKPY FNEAGYDKQL GRAEGEKNSV SYNENAFLIT CKSMISMLRK 240
  241 PPKHFEMLVK DHFTHRAQHV LAACKAYMEG VPVGSSANLQ GNSTTNSTGF KIMLSKLYPK 300
  301 LLEAFSEIGV DCVQEIGPES 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.522879
Match: 3cegA
Description: No description for 3cegA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle