| Protein: | FIT_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 318 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FIT_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
228.0 | [0..1] | [318..1] |
|
Region A: Residues: [1-120] |
1 11 21 31 41 51
| | | | | |
1 MEGRVNALSN INDLELHNFL VDPNFDQFIN LIRGDHQTID ENPVLDFDLG PLQNSPCFID 60
61 ENQFIPTPVD DLFDELPDLD SNVAESFRSF DGDSVRAGGE EDEEDYNDGD DSSATTTNND 120
121
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [121-201] |
1 11 21 31 41 51
| | | | | |
1 GTRKTKTDRS RTLISERRRR GRMKDKLYAL RSLVPNITKM DKASIVGDAV LYVQELQSQA 60
61 KKLKSDIAGL EASLNSTGGY Q
|
| Detection Method: | |
| Confidence: | 14.69897 |
| Match: | 1nkpA |
| Description: | Myc prot-oncogene protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.12507195426228 | bayes_pls_golite062009 |
| nucleic acid binding | 0.43204604575196 | bayes_pls_golite062009 |
| DNA binding | 0.40884226851256 | bayes_pls_golite062009 |
| transcription regulator activity | 0.31759335140578 | bayes_pls_golite062009 |
| transcription factor activity | 0.09721565916723 | bayes_pls_golite062009 |
|
Region A: Residues: [202-318] |
1 11 21 31 41 51
| | | | | |
1 EHAPDAQKTQ PFRGINPPAS KKIIQMDVIQ VEEKGFYVRL VCNKGEGVAP SLYKSLESLT 60
61 SFQVQNSNLS SPSPDTYLLT YTLDGTCFEQ SLNLPNLKLW ITGSLLNQGF EFIKSFT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.854 | d.93.1 | SH2 domain |
