YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|11280091
Organism:	Neisseria meningitidis
Length:	202 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11280091.

Description	E-value	Query Range	Subject Range
Y180_NEIG1 - Maf-like protein NGO0180 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=NGO0180 PE=3 SV=... gi\|226512126, gi... - gi\|254493086\|ref\|ZP_05106257.1\| maf-like protein [Neisseria gonorrhoeae 1291], gi\|226512126\|gb\|EEH61... gi\|193933106, gi... - gi\|194097816\|ref\|YP_002000859.1\| Maf-like protein [Neisseria gonorrhoeae NCCP11945], gi\|193933106\|gb...	263.0	[0..2]	[202..15]
MAF_BACHD - Septum formation protein Maf OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / J... MAF_BACHD - Septum formation protein Maf OS=Bacillus halodurans GN=maf PE=3 SV=1	260.0	[0..1]	[197..1]
Y124_CHRVO - Maf-like protein CV_0124 OS=Chromobacterium violaceum GN=CV_0124 PE=3 SV=1 Y124_CHRVO - Maf-like protein CV_0124 OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NB...	256.0	[0..2]	[196..6]
gi\|11280090 - pir\|\|B81925 hypothetical protein NMA0802 [imported] - Neisseria meningitidis (strain Z2491 serogroup... Y802_NEIMA - Maf-like protein NMA0802 OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN=NMA08... Y802_NEIMA - Maf-like protein NMA0802 OS=Neisseria meningitidis serogroup A GN=NMA0802 PE=3 SV=1	255.0	[0..1]	[196..1]
Y087_CLOTH - Maf-like protein Cthe_0087 OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /... gi\|196199334, gi... - gi\|196251371\|ref\|ZP_03150041.1\| maf protein [Clostridium thermocellum DSM 4150], gi\|196199334\|gb\|EDX...	254.0	[0..1]	[195..1]
Y4160_PSEU2 - Maf-like protein Psyr_4160 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=Psyr_4160 PE=3 SV=...	254.0	[0..1]	[193..1]
gi\|606188\|gb\|AAA... - ORF_f217; orfE of ECMRED, uses 2nd start [Escherichia coli] gi\|606188 - gi\|606188\|gb\|AAA58051.1\| ORF_f217; orfE of ECMRED, uses 2nd start [Escherichia coli]	253.0	[0..1]	[192..21]
Y4169_PSE14 - Maf-like protein PSPPH_4169 OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) GN=PS...	253.0	[0..1]	[193..1]
MAF_BACC1 - Septum formation protein Maf OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=maf PE=3 SV=1	253.0	[0..1]	[195..13]
gi\|238860385, gi... - gi\|238902348\|ref\|YP_002928144.1\| hypothetical protein BWG_2948 [Escherichia coli BW2952], gi\|2388603... gi\|242378783, gi... - gi\|251786510\|ref\|YP_003000814.1\| hypothetical protein B21_03058 [Escherichia coli BL21], gi\|24237878... gi\|253979241, gi... - gi\|254289934\|ref\|YP_003055682.1\| Maf-like protein [Escherichia coli BL21(DE3)], gi\|253979241\|gb\|ACT4... gi\|226840031, gi... - gi\|254038407\|ref\|ZP_04872465.1\| septum formation protein Maf [Escherichia sp. 1_1_43], gi\|226840031\|... gi\|253975085, gi... - gi\|254163184\|ref\|YP_003046292.1\| Maf-like protein [Escherichia coli B str. REL606], gi\|253975085\|gb\|... gi\|124500544, gi... - gi\|124528521\|ref\|ZP_01699810.1\| maf protein [Escherichia coli B], gi\|124500544\|gb\|EAY48016.1\| maf pr... gi\|157162725, gi... - gi\|75197190\|ref\|ZP_00707260.1\| COG0424: Nucleotide-binding protein implicated in inhibition of septu... gi\|170018509, gi... - gi\|170018509\|ref\|YP_001723463.1\| Maf-like protein [Escherichia coli ATCC 8739], gi\|169753437\|gb\|ACA7... gi\|89110009, gi\|... - gi\|89110009\|ref\|AP_003789.1\| hypothetical protein [Escherichia coli str. K-12 substr. W3110], gi\|856... gi\|170082778, gi... - gi\|170082778\|ref\|YP_001732098.1\| hypothetical protein ECDH10B_3424 [Escherichia coli str. K-12 subst... YHDE_ECOLI - Maf-like protein yhdE - Escherichia coli EG11298 - dTTP /UTP pyrophosphatase; m(5)UTP /m(5)CTP /pseudo-UTP pyrophosphatase / dTTP /UTP pyrophosphatase; m(5... gi\|194421903, gi... - gi\|83585382\|ref\|ZP_00924028.1\| COG0424: Nucleotide-binding protein implicated in inhibition of septu... EG11298 - dTTP /UTP pyrophosphatase; m(5)UTP /m(5)CTP /pseudo-UTP pyrophosphatase / dTTP /UTP pyrophosphatase; m(5...	253.0	[0..1]	[192..1]

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Predicted Domain #1

Region A:
Residues: [1-202]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTLYLGSNS PRRMEILTQL GYRVIQLPAG IDESVKAGET PFAYVQRMAE EKNRTALTLF  60
   61 CETNGTMPDF PLITADTCVV SDGIILGKPR SQAEAIEFLN RLSGKQHTVL TAVCIHYRGK 120
  121 TSSRVQTNRV VFKPLSSEEI SAYVQSGEPM DKAGAYAVQG IGGIFIQSIE GSFSGIMGLP 180
  181 VYETVSMLQD LGYRSPLSAL KP

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	66.39794
Match:	1ex2A
Description:	Maf protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
binding	1.72783485959922	bayes_pls_golite062009
pyrophosphatase activity	0.442220291187313	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides	0.422005572981264	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	0.421915415135494	bayes_pls_golite062009
protein binding	0.39728703257702	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: