| Protein: | ATG4A_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 467 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATG4A_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
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591.0 | [0..1] | [467..1] |
|
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500.0 | [0..36] | [467..4] |
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492.0 | [0..9] | [467..4] |
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486.0 | [0..9] | [458..275] |
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473.0 | [0..99] | [467..102] |
|
Region A: Residues: [1-105] |
1 11 21 31 41 51
| | | | | |
1 MKALCDRFVP QQCSSSSKSD THDKSPLVSD SGPSDNKSKF TLWSNVFTSS SSVSQPYRES 60
61 STSGHKQVCT TRNGWTAFVK RVSMASGAIR RFQERVLGPN RTGLP
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.595 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.595 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.385 | a.24.18 | Description not found. |
| View | Download | 0.271 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.271 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.269 | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
| View | Download | 0.262 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.262 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.235 | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
|
Region A: Residues: [106-467] |
1 11 21 31 41 51
| | | | | |
1 STTSDVWLLG VCYKISADEN SGETDTGTVL AALQLDFSSK ILMTYRKGFE PFRDTTYTSD 60
61 VNWGCMIRSS QMLFAQALLF HRLGRAWTKK SELPEQEYLE TLEPFGDSEP SAFSIHNLII 120
121 AGASYGLAAG SWVGPYAICR AWESLACKKR KQTDSKNQTL PMAVHIVSGS EDGERGGAPI 180
181 LCIEDATKSC LEFSKGQSEW TPIILLVPLV LGLDSVNPRY IPSLVATFTF PQSVGILGGK 240
241 PGASTYIVGV QEDKGFYLDP HEVQQVVTVN KETPDVDTSS YHCNVLRYVP LESLDPSLAL 300
301 GFYCRDKDDF DDFCLRALKL AEESNGAPLF TVTQTHTAIN QSNYGFADDD SEDEREDDWQ 360
361 ML
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| Detection Method: | |
| Confidence: | 133.0 |
| Match: | 2d1iA |
| Description: | Structure of human Atg4b |
Matching Structure (courtesy of the PDB): |
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