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View Structure Prediction Details

Protein: gi|55624518
Organism: Pan troglodytes
Length: 298 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|55624518.

Description E-value Query
Range
Subject
Range
GOLP3_MOUSE - Golgi phosphoprotein 3 OS=Mus musculus GN=Golph3 PE=1 SV=1
gi|149027294, gi... - gi|62461580|ref|NP_076467.2| golgi phosphoprotein 3 (coat-protein) [Rattus norvegicus], gi|62205048|...
0.0 [1..298] [1..298]
GOLP3_RAT - Golgi phosphoprotein 3 OS=Rattus norvegicus GN=Golph3 PE=1 SV=1
0.0 [1..298] [1..298]
gi|220944844, gi... - gi|220954760|gb|ACL89923.1| l(2)s5379-PA [synthetic construct], gi|220944844|gb|ACL84965.1| l(2)s537...
l(2)s5379-PA, l(... - The gene lethal (2) s5379 is referred to in FlyBase by the symbol Dmel\l(2)s5379 (CG7085, FBgn001070...
0.0 [6..298] [2..294]
gi|197246951, gi... - gi|63100626|gb|AAH95205.1| Golph3 protein [Danio rerio], gi|197246951|gb|AAI64056.1| Golph3 protein ...
0.0 [1..298] [1..295]
gi|114559330, gi... - gi|114559330|ref|XP_001169746.1| PREDICTED: GPP34-related protein isoform 4 [Pan troglodytes], gi|11...
GOLPH3L - golgi phosphoprotein 3-like
0.0 [1..298] [1..284]
gi|109016095, gi... - gi|109016095|ref|XP_001102928.1| PREDICTED: similar to GPP34-related protein isoform 3 [Macaca mulat...
CCDS966.1_1 - null
gi|90078452 - gi|90078452|dbj|BAE88906.1| unnamed protein product [Macaca fascicularis]
0.0 [1..298] [1..284]
gi|31197197, gi|... - gi|31197197|ref|XP_307546.1| Anopheles gambiae str. PEST AGAP012632-PA [Anopheles gambiae str. PEST]...
AGAP012632-PA, A... - golgi phosphoprotein 3|protein_coding|UNKN:19369809:19371967:-1|gene:AGAP012606, Golgi phosphoprotei...
0.0 [6..298] [2..291]
GLP3L_BOVIN - Golgi phosphoprotein 3-like OS=Bos taurus GN=GOLPH3L PE=2 SV=1
0.0 [1..298] [1..284]

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Predicted Domain #1
Region A:
Residues: [1-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSLTQRSSG LVQRRTEASR NAADKERAAG GGAGSSEDDA QSRRDEQDDD DKGDSKETRL  60
   61 TLMEEVLLLG LKDREGYTSF WNDCISSGLR GCMLIELALR GRLQLEACGM RRKSLLTRKV 120
  121 ICKSDAPTGD VLLDEALKHV KETQPPETVQ NWIELLSGET WNPLKLHYQL RNVRERLAKN 180
  181 LVEKGVLTTE KQNFLLFDMT THPLTNNNIK QRLIKKVQEA VLDKW

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [226-298]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VNDPHRMDRR LLALIYLAHA SDVLENAFAP LLDEQYDLAT KRVRQLLDLD PEVECLKANT  60
   61 NEVLWAVVAA FTK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.502 0.558 Golgi apparatus a.39.1 EF-hand
View Download 0.535 0.003 cytoplasm a.24.13 Domain of the SRP/SRP receptor G-proteins
View Download 0.544 0.001 Golgi apparatus a.101.1 Uteroglobin-like
View Download 0.538 0.001 Golgi apparatus a.50.1 Anaphylotoxins (complement system)
View Download 0.935 N/A N/A a.112.1 Description not found.


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