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View Structure Prediction Details

Protein: gi|23615501, gi|...
Organism: Plasmodium falciparum 3D7
Length: 505 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|23615501, gi|....

Description E-value Query
Range
Subject
Range
gi|16805258, gi|... - gi|7768290|emb|CAB11139.2| conserved Plasmodium protein, unknown function [Plasmodium falciparum 3D7...
646.0 [0..1] [493..1]
gi|56496767 - gi|56496767|emb|CAH96790.1| conserved hypothetical protein in P. falciparum [Plasmodium berghei]
gi|68069931 - gi|68069931|ref|XP_676877.1| hypothetical protein [Plasmodium berghei strain ANKA]
629.0 [0..1] [505..1]
gi|82705915 - gi|82705915|ref|XP_727166.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23482878 - gi|23482878|gb|EAA18731.1| hypothetical protein [Plasmodium yoelii yoelii]
624.0 [0..1] [493..3]
gi|70953927 - gi|70953927|ref|XP_746035.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56526535 - gi|56526535|emb|CAH76908.1| conserved hypothetical protein in P. falciparum [Plasmodium chabaudi cha...
605.0 [0..1] [495..1]

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Predicted Domain #1
Region A:
Residues: [1-172]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDVFAIFQK KNKTKKRSSI TDNTENKNKR KSLFHLNRKN PRRAHNEEDT FNSYEPLNKL  60
   61 LNEKKINNDL ENIVVVDFPP LPLKNTEVCL SFYYIQYLRN QLLYGNQNIQ IDENTRMIAE 120
  121 ALLDKIENNI YELENKEYSE DKYKNDIKIL VYKSIYDRYY KIITTFLTYS DD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [173-275]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPLPSNLYEY TLNNGAYIRS RKNNDFNCRE NIHNIYSYLD NVEVGENDLS INDEKIYIDN  60
   61 IDISKATILN KALINIDIDI EYLPLKINSS YYYNNLQYAK LFL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [276-505]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDAVNMSLYD KALGELVVVK ALVDIPNVEI EFIEGFDIKE MKAGERQWIP IYIAISLSSY  60
   61 AYVDVEFPFW FYIKNFINIK EQEYKNLNEL FDLPSPYFFE ICYMFLDQKI FSKATPIETV 120
  121 GQKSYFKYMA KVAAIFFVNI MLATTYKYVH IKEYNSIRYV EDIKHCREEK IIKHLEEQDY 180
  181 SETYLVNLSL YSFWKYDKNL NEKTNTIDFT SYLLEPFIKE ENEDNVLMDL 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.93
Match: 2q9qA
Description: No description for 2q9qA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle