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View Structure Prediction Details

Protein: gi|23615501, gi|...
Organism: Plasmodium falciparum 3D7
Length: 505 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|23615501, gi|....

Description E-value Query
Range
Subject
Range
gi|16805258, gi|... - gi|7768290|emb|CAB11139.2| conserved Plasmodium protein, unknown function [Plasmodium falciparum 3D7...
646.0 [0..1] [493..1]
gi|56496767 - gi|56496767|emb|CAH96790.1| conserved hypothetical protein in P. falciparum [Plasmodium berghei]
gi|68069931 - gi|68069931|ref|XP_676877.1| hypothetical protein [Plasmodium berghei strain ANKA]
629.0 [0..1] [505..1]
gi|82705915 - gi|82705915|ref|XP_727166.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23482878 - gi|23482878|gb|EAA18731.1| hypothetical protein [Plasmodium yoelii yoelii]
624.0 [0..1] [493..3]
gi|70953927 - gi|70953927|ref|XP_746035.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56526535 - gi|56526535|emb|CAH76908.1| conserved hypothetical protein in P. falciparum [Plasmodium chabaudi cha...
605.0 [0..1] [495..1]

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Predicted Domain #1
Region A:
Residues: [1-172]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDVFAIFQK KNKTKKRSSI TDNTENKNKR KSLFHLNRKN PRRAHNEEDT FNSYEPLNKL  60
   61 LNEKKINNDL ENIVVVDFPP LPLKNTEVCL SFYYIQYLRN QLLYGNQNIQ IDENTRMIAE 120
  121 ALLDKIENNI YELENKEYSE DKYKNDIKIL VYKSIYDRYY KIITTFLTYS DD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [173-275]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPLPSNLYEY TLNNGAYIRS RKNNDFNCRE NIHNIYSYLD NVEVGENDLS INDEKIYIDN  60
   61 IDISKATILN KALINIDIDI EYLPLKINSS YYYNNLQYAK LFL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [276-505]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDAVNMSLYD KALGELVVVK ALVDIPNVEI EFIEGFDIKE MKAGERQWIP IYIAISLSSY  60
   61 AYVDVEFPFW FYIKNFINIK EQEYKNLNEL FDLPSPYFFE ICYMFLDQKI FSKATPIETV 120
  121 GQKSYFKYMA KVAAIFFVNI MLATTYKYVH IKEYNSIRYV EDIKHCREEK IIKHLEEQDY 180
  181 SETYLVNLSL YSFWKYDKNL NEKTNTIDFT SYLLEPFIKE ENEDNVLMDL 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.93
Match: 2q9qA
Description: No description for 2q9qA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle