| Protein: | nhr-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 472 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nhr-2.
| Description | E-value | Query Range |
Subject Range |
|
|
236.0 | [0..1] | [472..3] |
|
Region A: Residues: [1-71] |
1 11 21 31 41 51
| | | | | |
1 MVPMNPELMH YPNQPHMMPG YPMINAYQQS YLQNPAQWTP EMLLCMQMQM QQMVPGTATN 60
61 STYMPPQSKN T
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [72-213] |
1 11 21 31 41 51
| | | | | |
1 VTPNATSPLS QISDRDSGND TISPPLTSQN SATTPNYHNQ PQMQLTPLQQ AKPEKEEISP 60
61 YAINNILSST QSSPDNGNEA DDKENSSVRR NTFPASSAST KKPRGTPYDR TNTPMTVVPQ 120
121 MPQFAPDFSN YNLTMNAWSE FF
|
| Detection Method: | |
| Confidence: | 0.996 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
|
Region A: Residues: [214-313] |
1 11 21 31 41 51
| | | | | |
1 KKDRCMVCGD NSTGYHYGVQ SCEGCKGFFR RSVHKNIAYV CTKGENCTFS YENCAANRGV 60
61 RTRCQACRFA KCLAVGMNRD NVRVNKETDK DVKPSVASPN
|
| Detection Method: | |
| Confidence: | 25.69897 |
| Match: | 1ynwB |
| Description: | Crystal Structure of Vitmain D Receptor and 9-cis Retinoic Acid Receptor DNA-Binding Domains Bound to a DR3 Response Element |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [314-472] |
1 11 21 31 41 51
| | | | | |
1 FEMTSQVKEL TAAFVANMPC STHLTSGTHA IGAIKKFIES VPALSSLLPK DEKALEMSIQ 60
61 KVMSGILAIR AAFTFDPITF YSCENPVNLL RGGIRNTVFN DCEVALLSGI HILQIVNGGV 120
121 AEIFTSYCQG LRHQLSQTHL QEIGLCDRLL MRLGPYLNQ
|
| Detection Method: | |
| Confidence: | 15.69897 |
| Match: | 1e3kA |
| Description: | Progesterone receptor |
Matching Structure (courtesy of the PDB): |
|
