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View Structure Prediction Details

Protein: gi|7494409
Organism: Plasmodium falciparum
Length: 370 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7494409.

Description E-value Query
Range
Subject
Range
gi|124505671, gi... - gi|23613376|ref|NP_703220.1| RIFIN [Plasmodium falciparum 3D7], gi|23510592|emb|CAD48976.1| rifin [P...
466.0 [0..1] [370..1]
gi|23305099 - gi|23305099|gb|AAN17004.1|AF483823_1 variant surface antigen rifin [Plasmodium falciparum]
451.0 [0..1] [354..1]

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Predicted Domain #1
Region A:
Residues: [1-71]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVHYINILL FALPLNILEH NKNEPHTTPH HPPNTRLLCE CELYSPANYD SDPEMKRVMQ  60
   61 QFVDRTTQRF H

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [72-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EYDERMKTTR QKCKDKCDKE IQNIILKDKL EKQMEQQLTT LETKIDTNDI PTCVCEKSLA  60
   61 DKTEKFCLNC GVQLGGGVLQ ASGLLGGIGQ LGLDAWKAAA LVTAKELAEK AGAAKGLAEG 120
  121 NAHGMKIVIH HLKELHIDKL V

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [213-370]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGICEKISST GHYANITNFA NTIIQQRGTM CGASGKNLGK DMCTKISIKL GTLKPDGIRP  60
   61 GLPDKDAVTK VLNGLVEQAD KAAAHVTKTT SESVTAAIKA RETALIEGRF ESSITSINAS 120
  121 IIAIIVIVLI MVIIYLILRY RRKKKMKKKL QYIKLLEE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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