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View Structure Prediction Details

Protein: gi|7494409
Organism: Plasmodium falciparum
Length: 370 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7494409.

Description E-value Query
Range
Subject
Range
gi|124505671, gi... - gi|23613376|ref|NP_703220.1| RIFIN [Plasmodium falciparum 3D7], gi|23510592|emb|CAD48976.1| rifin [P...
466.0 [0..1] [370..1]
gi|23305099 - gi|23305099|gb|AAN17004.1|AF483823_1 variant surface antigen rifin [Plasmodium falciparum]
451.0 [0..1] [354..1]

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Predicted Domain #1
Region A:
Residues: [1-71]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVHYINILL FALPLNILEH NKNEPHTTPH HPPNTRLLCE CELYSPANYD SDPEMKRVMQ  60
   61 QFVDRTTQRF H

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [72-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EYDERMKTTR QKCKDKCDKE IQNIILKDKL EKQMEQQLTT LETKIDTNDI PTCVCEKSLA  60
   61 DKTEKFCLNC GVQLGGGVLQ ASGLLGGIGQ LGLDAWKAAA LVTAKELAEK AGAAKGLAEG 120
  121 NAHGMKIVIH HLKELHIDKL V

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.509 N/A N/A a.24.4 Hemerythrin
View Download 0.312 N/A N/A a.24.9 alpha-catenin/vinculin
View Download 0.308 N/A N/A a.24.3 Cytochromes
View Download 0.299 N/A N/A f.14.1 Voltage-gated potassium channels
View Download 0.286 N/A N/A a.24.3 Cytochromes

Predicted Domain #3
Region A:
Residues: [213-370]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGICEKISST GHYANITNFA NTIIQQRGTM CGASGKNLGK DMCTKISIKL GTLKPDGIRP  60
   61 GLPDKDAVTK VLNGLVEQAD KAAAHVTKTT SESVTAAIKA RETALIEGRF ESSITSINAS 120
  121 IIAIIVIVLI MVIIYLILRY RRKKKMKKKL QYIKLLEE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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