YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|7494407
Organism: Plasmodium falciparum
Length: 334 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7494407.

Description E-value Query
Range
Subject
Range
gi|124505151, gi... - gi|4494001|emb|CAB39060.1| rifin (3D7-rifT3-7) [Plasmodium falciparum 3D7], gi|16805327|ref|NP_47335...
427.0 [0..1] [334..1]
gi|5901723 - gi|5901723|gb|AAD55383.1|AF161311_1 variant surface antigen rifin 3 [Plasmodium falciparum]
400.0 [0..1] [334..1]

Back

Predicted Domain #1
Region A:
Residues: [1-67]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLNYTNILL FYLSLNILSS SSEVYNQRNH YITRTPKATT RTLCECELYA PSNYDNDPEM  60
   61 QKVMENY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [68-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NRQTSQRFEE YNERVIKNRQ KCKEQCDKEI QKIILKDKLE KELMNKFATL QTDIQSDAIP  60
   61 TCVCEKSVAD KVEKTCLKCG GVLGSGIAPS VGLLGTVAID QWTNAALLDA AQKGIQAGID 120
  121 TVVAELEYVA ERFDDIGINI VGMINKET

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [216-334]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YRCPQALIES IYAAKQKVCD NVGNPAPTCH RVGQDGTSIW FRPEVLKATQ DGIDAAETVE  60
   61 KAEIVLINEE SAHLYSAIGY SVLAILIIVL VMLIIYLILR YRRKKKMKKK LQYIKLLEE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle