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View Structure Prediction Details

Protein: gi|7494407
Organism: Plasmodium falciparum
Length: 334 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7494407.

Description E-value Query
Range
Subject
Range
gi|124505151, gi... - gi|4494001|emb|CAB39060.1| rifin (3D7-rifT3-7) [Plasmodium falciparum 3D7], gi|16805327|ref|NP_47335...
427.0 [0..1] [334..1]
gi|5901723 - gi|5901723|gb|AAD55383.1|AF161311_1 variant surface antigen rifin 3 [Plasmodium falciparum]
400.0 [0..1] [334..1]

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Predicted Domain #1
Region A:
Residues: [1-67]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLNYTNILL FYLSLNILSS SSEVYNQRNH YITRTPKATT RTLCECELYA PSNYDNDPEM  60
   61 QKVMENY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [68-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NRQTSQRFEE YNERVIKNRQ KCKEQCDKEI QKIILKDKLE KELMNKFATL QTDIQSDAIP  60
   61 TCVCEKSVAD KVEKTCLKCG GVLGSGIAPS VGLLGTVAID QWTNAALLDA AQKGIQAGID 120
  121 TVVAELEYVA ERFDDIGINI VGMINKET

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.229 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.210 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain

Predicted Domain #3
Region A:
Residues: [216-334]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YRCPQALIES IYAAKQKVCD NVGNPAPTCH RVGQDGTSIW FRPEVLKATQ DGIDAAETVE  60
   61 KAEIVLINEE SAHLYSAIGY SVLAILIIVL VMLIIYLILR YRRKKKMKKK LQYIKLLEE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.458 N/A N/A a.48.3 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
View Download 0.403 N/A N/A a.163.1 Crustacean CHH/MIH/GIH neurohormone
View Download 0.365 N/A N/A a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.303 N/A N/A a.76.1 Iron-dependent represor protein, dimerization domain
View Download 0.301 N/A N/A a.48.3 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle