| Protein: | gi|53981366, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 1279 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for gi|53981366, gi|....
|
Region A: Residues: [1-322] |
1 11 21 31 41 51
| | | | | |
1 MAKAAAAARA LQTRAEILST SQLVVPQAAP LQPTATPTAL AAVQAQVSPD PEAQAEADME 60
61 AMRQNMTRLQ DMLRQMQEQQ QAYEAARWTK VTSAPILQYS AGYVPPQVHP QVTTQPFPPQ 120
121 VAQAPMYFAK QQLAVAAHPA PHVQQPVAAQ VHHQPLGQAP QTVAEGVSAL QAQLQAFLQQ 180
181 LNQPHCISST NPSAHPEGNT SQGAPNWLPP IQPSLGVSPW NQGPQFNFVN AAQALTVRRQ 240
241 APTPGFGTNQ VSIQAAMTWS QPIFDPSMAA QQVSPVGAGQ SNATAQPHAQ AAISPFATPY 300
301 PQQGAVNRTG GEKGLLLSGG IK
|
| Detection Method: |  |
| Confidence: | 5.39794 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [323-536] |
1 11 21 31 41 51
| | | | | |
1 TRPIPPQFKF PPVPRYSGET DPKEFLSIYE SAIEAAHGDE NTKAKVIHLA LDGIARSWYF 60
61 NLPANSIYSW EQLRDVFVLN FRGTYEEPKT QQHLLGIRQR QGESIREYMR RFSQAWCQVQ 120
121 DITEASVINA ASAGLLEGEL TRKITNKEPQ TLEHLLRIID GFARGEENSK RRQAIQAEYD 180
181 KASIAAAQAQ AQVQVAEPPP PFIRQSQPAI QGQP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [537-622] |
1 11 21 31 41 51
| | | | | |
1 PRQGQAPLTW RKFRTDRAGK AVMAIEEVQA LRKEFDAQQA SNHQQPARKK RRVIQVITRA 60
61 DPPSQLSKRQ KKMQIRMIHS ITLAGE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [623-793] |
1 11 21 31 41 51
| | | | | |
1 GAPQYLNQLI SFGPEDAEGV MFPHQDPLVI SAEIAGFEVR RILVDGGSSA DVIFAEAYAK 60
61 MGFPTQALTP APASLRGFGG EAVQVLGQAL LLIAFGSGEN RREEQILFDV VDILYNYNAI 120
121 FSRATLNKFE AISHHNYLKL KMPGPAGVIV VKGLQPSAAS KGDLAIINRA V
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [794-1279] |
1 11 21 31 41 51
| | | | | |
1 HSVETEPHER PKHTPKPTPH GKITKVQIDD ADPTKFVSLG GDIGEEEVES ILEVLKKNID 60
61 IFAWSPDEVG GVPVDLIMHH LAVKPDIKPR KRKLRTMSAD RQEAAKAEVQ KLLRAGVIQE 120
121 IDHPEWLANL VLVRKSNGKW RIMPFGLRNT GETFARLVYK VLGRQLGRNV EAYVDDIVVK 180
181 SRKAFDHAID LQETFDNLRA AGIRLNPEKN RTAIILSSFA GGSQCCPRPR NRVQTKTGLL 240
241 RLRSTARSED KAHKVIVPSQ YPLGEILRGK EVTGRLSKWA AELSPFDLHF VARSAIKSQV 300
301 LADFVAEWTA VMCSDGSWSH KGAGVAAVLF SPNGVPIRYA ARLQFDTTNN AAEYEAVLLG 360
361 LRKAKALGIR RLLIRTDSKL VTSHVDKSFE AKEEGMKRYL EAVQSMEKCF TGITVEHLPR 420
421 DQNEEADALA KSAACGGPHS PGIFFEVLHA PSVSMDSSEV MAIDQKKLGE DPYDWRTPFV 480
481 KHLETG
|
| Detection Method: | |
| Confidence: | 37.39794 |
| Match: | 1rw3A |
| Description: | The crystal structure of the monomeric reverse transcriptase from Moloney murine leukemia virus |
Matching Structure (courtesy of the PDB): |
|
