YRC Public Data Repository - Protein Structure Prediction

Protein:	EG13859
Organism:	Escherichia coli K-12
Length:	382 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EG13859.

Description	E-value	Query Range	Subject Range
gi\|221325445 - gi\|221325445\|ref\|ZP_03606739.1\| hypothetical protein BsubsS_21331 [Bacillus subtilis subsp. subtilis... gi\|221321161 - gi\|221321161\|ref\|ZP_03602455.1\| hypothetical protein BsubsJ_21180 [Bacillus subtilis subsp. subtilis... gi\|221316249 - gi\|221316249\|ref\|ZP_03598054.1\| hypothetical protein BsubsN3_21232 [Bacillus subtilis subsp. subtili... YXEK_BACSU - Putative monooxygenase yxeK OS=Bacillus subtilis GN=yxeK PE=3 SV=1 YXEK_BACSU - Putative monooxygenase YxeK OS=Bacillus subtilis (strain 168) GN=yxeK PE=3 SV=1	301.0	[0..14]	[380..2]
gi\|75704065, gi\|... - gi\|75910340\|ref\|YP_324636.1\| monooxygenase-like [Anabaena variabilis ATCC 29413], gi\|75704065\|gb\|ABA...	293.0	[0..14]	[380..1]
gi\|186682156, gi... - gi\|23127270\|ref\|ZP_00109144.1\| COG2141: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopt...	289.0	[0..14]	[380..1]
gi\|77380469, gi\|... - gi\|77456466\|ref\|YP_345971.1\| DszA family monooxygenase [Pseudomonas fluorescens Pf0-1], gi\|77380469\|...	286.0	[0..16]	[382..2]
gi\|68348048, gi\|... - gi\|70733749\|ref\|YP_257389.1\| NtaA/SnaA/SoxA family monooxygenase [Pseudomonas fluorescens Pf-5], gi\|...	279.0	[0..11]	[381..2]
gi\|28872298, gi\|... - gi\|28872298\|ref\|NP_794917.1\| DszA family monooxygenase [Pseudomonas syringae pv. tomato str. DC3000]... tr\|Q87UV6\|Q87UV6... - Monooxygenase, DszA family OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=PSPTO_5186 PE=4 SV=...	278.0	[0..16]	[382..2]

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Predicted Domain #1

Region A:
Residues: [1-382]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQDAAPRLTF TLRDEERLMM KIGVFVPIGN NGWLISTHAP QYMPTFELNK AIVQKAEHYH  60
   61 FDFALSMIKL RGFGGKTEFW DHNLESFTLM AGLAAVTSRI QIYATAATLT LPPAIVARMA 120
  121 ATIDSISGGR FGVNLVTGWQ KPEYEQMGIW PGDDYFSRRY DYLTEYVQVL RDLWGTGKSD 180
  181 FKGDFFTMND CRVSPQPSVP MKVICAGQSD AGMAFSARYA DFNFCFGKGV NTPTAFAPTA 240
  241 ARMKQAAEQT GRDVGSYVLF MVIADETDDA ARAKWEHYKA GADEEALSWL TEQSQKDTRS 300
  301 GTDTNVRQMA DPTSAVNINM GTLVGSYASV ARMLDEVASV PGAEGVLLTF DDFLSGIETF 360
  361 GERIQPLMQC RAHLPALTQE VA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	69.69897
Match:	1tvlA
Description:	Structure of YTNJ from Bacillus subtilis
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	2.27882522649583	bayes_pls_golite062009
oxidoreductase activity	0.999190495150654	bayes_pls_golite062009
monooxygenase activity	0.494248729986463	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: