YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|25499690
Organism:	Clostridium acetobutylicum
Length:	215 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25499690.

Description	E-value	Query Range	Subject Range
gi\|241884351, gi... - gi\|241903285\|ref\|ZP_04788011.1\| HAD-superfamily hydrolase, subfamily IA, variant 3 [Thermoanaerobact... gi\|242258243, gi... - gi\|242258243\|ref\|ZP_04803066.1\| HAD-superfamily hydrolase, subfamily IA, variant 3 [Thermoanaerobact... gi\|166853930, gi... - gi\|167039690\|ref\|YP_001662675.1\| HAD family hydrolase [Thermoanaerobacter sp. X514], gi\|166853930\|gb... gi\|76589066, gi\|... - gi\|76795752\|ref\|ZP_00778124.1\| HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hy...	183.0	[0..1]	[209..1]
gi\|20808387 - gi\|20808387\|ref\|NP_623558.1\| predicted phosphatase/phosphohexomutase [Thermoanaerobacter tengcongens... gi\|254479378, gi... - gi\|254479378\|ref\|ZP_05092713.1\| haloacid dehalogenase-like hydrolase, putative [Carboxydibrachium pa... gi\|20517000, gi\|... - gi\|20808387\|ref\|NP_623558.1\| phosphatase/phosphohexomutase [Thermoanaerobacter tengcongensis MB4], g...	179.0	[0..1]	[209..1]
gi\|219993169, gi... - gi\|89211639\|ref\|ZP_01189993.1\| HAD-superfamily hydrolase subfamily IA, variant 3:HAD-superfamily hyd...	169.0	[0..1]	[210..1]
gi\|160427646, gi... - gi\|160878980\|ref\|YP_001557948.1\| HAD family hydrolase [Clostridium phytofermentans ISDg], gi\|1604276...	167.0	[0..1]	[211..1]
gi\|25303791 - pir\|\|D97005 probable phosphatase [imported] - Clostridium acetobutylicum gi\|15023749, gi\|... - gi\|15894142\|ref\|NP_347491.1\| phosphatase [Clostridium acetobutylicum ATCC 824], gi\|15023749\|gb\|AAK78...	166.0	[0..2]	[211..1]
gi\|229811380, gi... - gi\|229845694\|ref\|ZP_04465817.1\| phosphoglycolate phosphatase [Haemophilus influenzae 6P18H1], gi\|229... gi\|144985848, gi... - gi\|145633479\|ref\|ZP_01789208.1\| phosphoglycolate phosphatase [Haemophilus influenzae 3655], gi\|14498... GPH_HAEI8 - Phosphoglycolate phosphatase OS=Haemophilus influenzae (strain 86-028NP) GN=NTHI0697 PE=3 SV=1	166.0	[0..3]	[214..6]
gi\|145272121, gi... - gi\|145638526\|ref\|ZP_01794135.1\| phosphoglycolate phosphatase [Haemophilus influenzae PittII], gi\|145... gi\|53733330 - gi\|53733330\|ref\|ZP_00156383.2\| COG0546: Predicted phosphatases [Haemophilus influenzae R2866]	165.0	[0..3]	[214..6]
GPH_HAEIN - Phosphoglycolate phosphatase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) G... GPH_HAEIN - Phosphoglycolate phosphatase OS=Haemophilus influenzae GN=gph PE=3 SV=1	164.0	[0..3]	[214..6]
gi\|56961873, gi\|... - gi\|56961873\|ref\|YP_173595.1\| hypothetical protein ABC0091 [Bacillus clausii KSM-K16], gi\|56908107\|db...	162.0	[0..2]	[210..1]
gi\|88790279, gi\|... - gi\|88812493\|ref\|ZP_01127742.1\| 2-phosphoglycolate phosphatase [Nitrococcus mobilis Nb-231], gi\|88790...	161.0	[0..2]	[214..5]

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Predicted Domain #1

Region A:
Residues: [1-215]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKAVIFDMD GVLIDSEPLH LDYAFKLFKE LNITMTPNEY SKFIGTTSLY MWSNIKDTYN  60
   61 LENTVESLIN KERNGFFEFL SSPNTNIKPI DHIPELLGAL KENNFKTAVA SSSPMRVIKY 120
  121 IINNFELAKQ FNELVTGDYV ERSKPNPDIF LYAAKKLDVS PEQCVVIEDS HNGVLAAKNA 180
  181 GMKCIGFKNP NSGNQDLSKA DTIIHSFNEI DILNL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	39.0
Match:	2hszA
Description:	No description for 2hszA was found.

Predicted functions:

Term	Confidence	Notes
phosphatase activity	5.67874236681937	bayes_pls_golite062009
phosphoric ester hydrolase activity	5.47006620187028	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	4.48428199248982	bayes_pls_golite062009
hydrolase activity	4.39056655921797	bayes_pls_golite062009
phosphoprotein phosphatase activity	2.48898309484199	bayes_pls_golite062009
catalytic activity	1.55296860681783	bayes_pls_golite062009
nucleic acid binding	0.622587075720369	bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor	0.525704827211584	bayes_pls_golite062009
binding	0.504752091326444	bayes_pls_golite062009
kinase activity	0.497538501078274	bayes_pls_golite062009
DNA binding	0.452491037562571	bayes_pls_golite062009
protein serine/threonine phosphatase activity	0.438943767876088	bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups	0.381009626718837	bayes_pls_golite062009
inorganic cation transmembrane transporter activity	0.234328582197155	bayes_pls_golite062009
cation transmembrane transporter activity	0.201233537100321	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: