| Protein: | gi|16080636, gi|... |
| Organism: | Bacillus subtilis subsp. subtilis str. 168 |
| Length: | 457 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|16080636, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
319.0 | [0..2] | [443..684] |
|
Region A: Residues: [1-457] |
1 11 21 31 41 51
| | | | | |
1 MKKQSNIWLY FFGALGGALY GYDTGVISGA ILFMKKELGL NAFTEGLVVS SLLVGAILGS 60
61 GAAGKLTDRF GRKKAIMAAA LLFCIGGLGV ALAPNTGVMV LFRIILGLAV GTSTTIVPLY 120
121 LSELAPKHKR GALSSLNQLM ITVGILLSYI VNYIFADAEA WRWMLGLAAV PSLLLLIGIL 180
181 FMPESPRWLF TNGEESKAKK ILEKLRGTKD IDQEIHDIKE AEKQDEGGLK ELFDPWVRPA 240
241 LIAGLGLAFL QQFIGTNTII YYAPKTFTNV GFGNSASILG TVGIGTVNVL MTLVAIKIID 300
301 KIGRKPLLLF GNAGMVISLI VLALVNLFFN NTPAASWTTV ICLGVFIVVF AVSWGPVVWV 360
361 MLPELFPLHV RGIGTGVSTL MLHVGTLIVS LTYPILMEAI GISYLFLIYA AIGIMAFLFV 420
421 RFKVTETKGR SLEEIEQDLR DKNGQGGAAG KQQTVGT
|
| Detection Method: |  |
| Confidence: | 30.39794 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| hexose phosphate transmembrane transporter activity | 3.29248638217469 | bayes_pls_golite062009 |
| glucose-6-phosphate transmembrane transporter activity | 3.29248638217469 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 2.99050613058546 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 2.99050613058546 | bayes_pls_golite062009 |
| carbohydrate transmembrane transporter activity | 2.62141276633776 | bayes_pls_golite062009 |
| sugar transmembrane transporter activity | 2.47557586092261 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
| solute:hydrogen symporter activity | 2.10485633822652 | bayes_pls_golite062009 |
| binding | 1.89539096965643 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| monosaccharide transmembrane transporter activity | 1.6904339767429 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| sugar binding | 0.285073104957756 | bayes_pls_golite062009 |
