| Protein: | gi|42408185, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 357 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42408185, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
239.0 | [0..3] | [352..521] |
|
Region A: Residues: [1-118] |
1 11 21 31 41 51
| | | | | |
1 MGRSPCCDES GLKKGPWTPE EDEKLLHYIQ KNGHGSWRTL PRLAGLNRCG KSCRLRWTNY 60
61 LRPDIKRGKF SQEEEQTILH LHSILGNKWS AIATHLPGRT DNEIKNFWNT HLKKRLIQ
|
| Detection Method: |  |
| Confidence: | 44.69897 |
| Match: | 1h88C |
| Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [119-357] |
1 11 21 31 41 51
| | | | | |
1 MGFDPMTHRP RTDFFAALPQ LIALATLRDQ LAATACGGGG GGDTAAAAAA QIMQGAGGGG 60
61 GADVAIQAAK MQYLQCLLQS AASTIASAGS GGGGGGAMSA HDADAALAAA AAAAATCSSS 120
121 PAGSSVPITP TAVGHSGGGQ TQTTPCAFSE APVITSDDVE ANLRLLGCGA GGADAFTCHG 180
181 GSLPPLADLS DVTTTTMTNP LDWCSATASA SSCGGGGGAS SPFPWPEFFH DDPFITDFL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
