| Protein: | gi|50945499, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 456 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50945499, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
244.0 | [0..84] | [316..9] |
|
|
235.0 | [0..83] | [291..29] |
|
|
227.0 | [0..83] | [286..34] |
|
|
226.0 | [0..60] | [228..3] |
|
|
225.0 | [0..83] | [284..34] |
|
|
219.0 | [0..90] | [288..20] |
|
Region A: Residues: [1-81] |
1 11 21 31 41 51
| | | | | |
1 MTSTTTITTT NTTTTTTNNN NNPVSTTTTT TASHQRQSLP VAARPPHSSG SGSGSGGSHR 60
61 GASGGGSGGG GGGGGGGGGG G
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.533 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.530 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.530 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.483 | b.114.1 | N-utilization substance G protein NusG, insert domain |
| View | Download | 0.483 | b.114.1 | N-utilization substance G protein NusG, insert domain |
| View | Download | 0.464 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.464 | d.50.2 | Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain |
| View | Download | 0.464 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.452 | b.71.1 | Glycosyl hydrolase domain |
|
Region A: Residues: [82-198] |
1 11 21 31 41 51
| | | | | |
1 GGTNQACAAC KYQRRKCNPD CPMAPYFPAD QQRRFLNAHR LFGVSNILKT LRHLKPELCD 60
61 DAMRTLIYQA EMRAHDPVGG CCRVICDLER QLELDTAELN TVLHHLAMCR QAAAAGA
|
| Detection Method: | |
| Confidence: | 44.0 |
| Match: | PF03195.5 |
| Description: | No description for PF03195.5 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.712 | N/A | N/A | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.712 | N/A | N/A | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.521 | N/A | N/A | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.500 | N/A | N/A | a.7.14 | Description not found. |
| View | Download | 0.447 | N/A | N/A | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.447 | N/A | N/A | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.445 | N/A | N/A | a.69.4 | Description not found. |
| View | Download | 0.399 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.380 | N/A | N/A | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.335 | N/A | N/A | d.173.1 | Methionine synthase activation domain-like |
|
Region A: Residues: [199-277] |
1 11 21 31 41 51
| | | | | |
1 SGSVAAALPA GVLDDACADL DVTSSNQPLL LSAEHEVVDA LYANQEADAA ILHADGHHNQ 60
61 DESQREHHHG QPQQLYDYF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.678 | a.64.1 | Saposin |
| View | Download | 0.642 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.604 | g.63.1 | Mollusk pheromone |
| View | Download | 0.560 | a.64.1 | Saposin |
| View | Download | 0.534 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.506 | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.376 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.360 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
|
Region A: Residues: [278-343] |
1 11 21 31 41 51
| | | | | |
1 YYDSTAGDDV SSKPHLDINV DGMQHFDFDT NYDAEHKVEL TSDHQMPVGV DEHNQIDDKG 60
61 FEIKSG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.783 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.783 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.691 | d.52.10 | Description not found. |
| View | Download | 0.661 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.661 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.631 | d.52.10 | Description not found. |
| View | Download | 0.629 | d.52.10 | Description not found. |
| View | Download | 0.580 | a.64.1 | Saposin |
| View | Download | 0.580 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.538 | b.71.1 | Glycosyl hydrolase domain |
|
Region A: Residues: [344-456] |
1 11 21 31 41 51
| | | | | |
1 PSLVDVFDLR QEEEQVQTVD VNTDIEVKEM VDMNADIDVK TMVDENSNID IIKTMVDVNA 60
61 DIVDVVKTVV DVNGDIGVKE ELPELDNGKI IAGDATQMAE SSHCRLGLGV SSF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.739 | d.85.1 | RNA bacteriophage capsid protein |
| View | Download | 0.739 | d.85.1 | RNA bacteriophage capsid protein |
| View | Download | 0.730 | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.725 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.701 | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.681 | b.55.1 | PH domain-like |
| View | Download | 0.678 | d.93.1 | SH2 domain |
| View | Download | 0.630 | d.105.1 | Clathrin adaptor appendage, alpha and beta chain-specific domain |
| View | Download | 0.627 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.599 | b.61.1 | Avidin/streptavidin |
