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View Structure Prediction Details

Protein: gi|51964618, gi|...
Organism: Oryza sativa Japonica Group
Length: 824 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|51964618, gi|....

Predicted Domain #1
Region A:
Residues: [1-305]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENFSPRTLL NSILRITVLT SDGSTARPKP IQKYCQNVCD ISSIVSPLIE DLCESPEEQL  60
   61 NEVLRELGTA INRASGLIGN WQQTTSKIYF IWQIESVISD IQGCSLQLCQ LVNSLLPSLT 120
  121 GRACTCIEKL QDINYENMFD LVKESSLELV ETDTTSPENL SRLSSSLSLS TNLEFYMEAV 180
  181 SLENLRARAM RSENREEMDL ADKMIPLVNY MHDHLLRETQ LLSINGVPIP ADFCCPLSLE 240
  241 LMSDPVIVAS GQTYERVYIK LWLDEGFTIC PKTRQRLGHS NLIPNYTVKA LIANWCESHN 300
  301 IRLPD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.0
Match: 2qizA
Description: No description for 2qizA was found.

Predicted Domain #2
Region A:
Residues: [306-445]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PMKSLKLNFP LAASALQDSS TTGSSPLHPT VAAKGNIPGS PEADLYMRSL NRASPPHSVV  60
   61 HQNSHAHVNR AGHEASIKQS SENANGSASD VSRLSLAGSE TRESSLEERN AGSIGQTSEQ 120
  121 SIEEAFQASN LDRDSHDHVG 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [446-824]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSSVNGSLPN SGQLDAECDN GPSERTNYSS DASGEVTDGP SASSAPQREH LIPSRLADVR  60
   61 SRGQFVRRPS ERGFPRIISS SSMDTRSDLS AIENQVRKLV DDLRSDSVDV QRSATSDIRL 120
  121 LAKHNMENRI IIANCGAINL LVGLLHSPDS KTQEHAVTAL LNLSINDNNK IAIANADAVD 180
  181 PLIHVLETGN PEAKENSAAT LFSLSVIEEN KVRIGRSGAI KPLVDLLGNG TPRGKKDAAT 240
  241 ALFNLSILHE NKARIVQADA VKYLVELMDP AAGMVDKAVA VLANLATIPE GRTAIGQARG 300
  301 IPALVEVVEL GSARGKENAA AALLQLCTNS SRFCSIVLQE GAVPPLVALS QSGTPRAREK 360
  361 AQALLSYFRS QRHGNSARR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.154902
Match: 1ialA
Description: Importin alpha
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle