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Protein Overview: gi|51964618, gi|...

General Information:
Name(s) found: gi|51964618 [NCBI NR]
gi|50940413 [NCBI NR]
gi|42408388 [NCBI NR]
gi|222639787 [NCBI NR]
gi|115474447 [NCBI NR]
gi|113622789 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|51964618|ref|XP_507093.1| PREDICTED P0007D08.34 gene product [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|50940413|ref|XP_479734.1| putative arm repeat-containing protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|42408388|dbj|BAD09539.1| putative arm repeat-containing protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|222639787|gb|EEE67919.1| hypothetical protein OsJ_25785 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115474447|ref|NP_001060820.1| Os08g0110500 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113622789|dbj|BAF22734.1| Os08g0110500 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 824 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENFSPRTLL NSILRITVLT SDGSTARPKP IQKYCQNVCD ISSIVSPLIE DLCESPEEQL  60
   61 NEVLRELGTA INRASGLIGN WQQTTSKIYF IWQIESVISD IQGCSLQLCQ LVNSLLPSLT 120
  121 GRACTCIEKL QDINYENMFD LVKESSLELV ETDTTSPENL SRLSSSLSLS TNLEFYMEAV 180
  181 SLENLRARAM RSENREEMDL ADKMIPLVNY MHDHLLRETQ LLSINGVPIP ADFCCPLSLE 240
  241 LMSDPVIVAS GQTYERVYIK LWLDEGFTIC PKTRQRLGHS NLIPNYTVKA LIANWCESHN 300
  301 IRLPDPMKSL KLNFPLAASA LQDSSTTGSS PLHPTVAAKG NIPGSPEADL YMRSLNRASP 360
  361 PHSVVHQNSH AHVNRAGHEA SIKQSSENAN GSASDVSRLS LAGSETRESS LEERNAGSIG 420
  421 QTSEQSIEEA FQASNLDRDS HDHVGSSSVN GSLPNSGQLD AECDNGPSER TNYSSDASGE 480
  481 VTDGPSASSA PQREHLIPSR LADVRSRGQF VRRPSERGFP RIISSSSMDT RSDLSAIENQ 540
  541 VRKLVDDLRS DSVDVQRSAT SDIRLLAKHN MENRIIIANC GAINLLVGLL HSPDSKTQEH 600
  601 AVTALLNLSI NDNNKIAIAN ADAVDPLIHV LETGNPEAKE NSAATLFSLS VIEENKVRIG 660
  661 RSGAIKPLVD LLGNGTPRGK KDAATALFNL SILHENKARI VQADAVKYLV ELMDPAAGMV 720
  721 DKAVAVLANL ATIPEGRTAI GQARGIPALV EVVELGSARG KENAAAALLQ LCTNSSRFCS 780
  781 IVLQEGAVPP LVALSQSGTP RAREKAQALL SYFRSQRHGN SARR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..305] PSI-BLAST 35.0 No description for 2qizA was found.
    2 View Details [306..445] deduced N/A No confident structure predictions are available.
    3 View Details [446..824] PSI-BLAST 67.154902 Importin alpha


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle