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View Structure Prediction Details

Protein: ILI1_ORYSJ
Organism: Oryza sativa Japonica Group
Length: 104 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ILI1_ORYSJ.

Description E-value Query
Range
Subject
Range
PRE5_ARATH - Transcription factor PRE5 OS=Arabidopsis thaliana GN=PRE5 PE=1 SV=1
120.0 [0..14] [104..2]

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Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSRRSRSR RAGSSVPSSS SSSRTSISED QIAELLSKLQ ALLPESQARN GAHRGSAARV  60
   61 LQETCSYIRS LHQEVDNLSE TLAQLLASPD VTSDQAAVIR SLLM

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.21
Match: 1nkpA
Description: Myc prot-oncogene protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.943973904242711 bayes_pls_golite062009
nucleic acid binding 0.149729746506121 bayes_pls_golite062009
DNA binding 0.0947270587483513 bayes_pls_golite062009
transcription regulator activity 0.0195542062057319 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle