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View Structure Prediction Details

Protein: gi|108711213, gi...
Organism: Oryza sativa Japonica Group
Length: 335 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|108711213, gi....

Description E-value Query
Range
Subject
Range
gi|115951930 - gi|115951930|ref|XP_001184056.1| PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus purpura...
423.0 [0..2] [333..451]

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Predicted Domain #1
Region A:
Residues: [1-335]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAESKAG KSPEELLCAA AESGDAEAIT GLLAEGADPT HFDASGLTPL MHAATGGHAA  60
   61 VVQLLLDAGA PWNALSPTGI SAGDLASDSA TFDLLLDHAL RSELVLGTVA RRQAGPADSP 120
  121 AESYLESRVS FSEERVMDAD SKAVMMEWER PLMEAHARAV CSGGKVLNVG FGMGLVDTAI 180
  181 QRYEPEEHTI VEAHPEVYAR MLKLGWGEKK NVKVVFGRWQ DVLPQLGSYD GIFFDTYGEY 240
  241 YEDMREFHQH LPKLLKPGGI YSYFNGLCGD NAFFHVVYCQ LVALELANLG YSTQFIPLPV 300
  301 KDCLSEEIWN GVKQKYWQLD TYHLPVCQAE SEPEQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 87.0
Match: 1n11A
Description: Ankyrin-R
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 2.01632408655207 bayes_pls_golite062009
protein binding 1.7857660250142 bayes_pls_golite062009
histone methyltransferase activity 1.56961760328546 bayes_pls_golite062009
protein methyltransferase activity 1.46087153337818 bayes_pls_golite062009
lysine N-methyltransferase activity 0.93917809224422 bayes_pls_golite062009
protein-lysine N-methyltransferase activity 0.93917809224422 bayes_pls_golite062009
histone-lysine N-methyltransferase activity 0.93917809224422 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.575624446890277 bayes_pls_golite062009
kinase activity 0.553110393411521 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.468572563627993 bayes_pls_golite062009
protein kinase activity 0.348635473808088 bayes_pls_golite062009
nucleic acid binding 0.280340492381105 bayes_pls_golite062009
transcription regulator activity 0.200037902200316 bayes_pls_golite062009
N-methyltransferase activity 0.0926729539553439 bayes_pls_golite062009
DNA binding 0.0016834194928852 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle