| Protein: | ORR23_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 688 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ORR23_ORYSJ.
| Description | E-value | Query Range |
Subject Range |
|
|
408.0 | [0..15] | [688..17] |
|
Region A: Residues: [1-156] |
1 11 21 31 41 51
| | | | | |
1 MRAAEERKGV VPAARRRDQF PVGMRVLAVD DDPVCLKVLE TLLLRCQYHV TTTNQAAIAL 60
61 KMLRENRDMF DLVISDVHMP DMDGFKLLEL VGLEMDLPVI MLSVNGETKT VLKGITHGAC 120
121 DYLLKPVRIE ELRNIWQHVI RRKFSTRDRA NLDFYE
|
| Detection Method: |  |
| Confidence: | 63.045757 |
| Match: | 2oqrA |
| Description: | No description for 2oqrA was found. |
|
Region A: Residues: [157-423] |
1 11 21 31 41 51
| | | | | |
1 ECNKPPNADS DHVHGHVTCG SPDQSGRPSK KRKEYCSEEE DEGEVNTQDI DDPSAPKKPR 60
61 VVWSVELHRK FVAAVNQLGI DKAVPKRILE LMNVEKLTRE NVASHLQKYR LYLKRLSAVA 120
121 SQQVSIVAAL GGRDPFLHMG GFEGLQGYQA FTSSAALSSF TPHGLLNSPR NNPAALGTQG 180
181 VPASKSIQTM SGSHTLSHSI NDANKYHLSL PGNQKGNLGQ GLATSLGQTQ MQQKWIHEET 240
241 DDLSTILSGN GLSNGMSGTL QSVTSSP
|
| Detection Method: | |
| Confidence: | 23.522879 |
| Match: | 1ojlA |
| Description: | Crystal structure of a sigma54-activator suggests the mechanism for the conformational switch necessary for sigma54 binding |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [424-503] |
1 11 21 31 41 51
| | | | | |
1 LLPQELAECT QAKIVSQPSI RTSSVSSEHI EGAVGVSSGL LESRVSQQST IPLSGFSANG 60
61 LLIHGSFNNT CANKLGGTSS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [504-688] |
1 11 21 31 41 51
| | | | | |
1 SCAPARSSND LMVARDTKGG ASSFGGAMLL PPDTEQKYLN FGGGNGLKQK FDDRTADSLF 60
61 DLKFVWSSVP SSQLASNIGA HHAMSQRWNN SSSNSSNIGA RMIGQATSSG STVIPQMKTD 120
121 FLVSGDMAMP KNASDLSIPK LQSELSSSSC SFDGLLNSIV KVEKDDVTFS DDLGCGDFYS 180
181 LGACI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
